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Tags: Science and math
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49–72 of 150 · Most stars

Generation of protein sequences and evolutionary alignments via discrete diffusion models

  • discrete-diffusion
  • generative-model
  • multiple-sequence-alignment
  • protein-sequences

Nonconvex embedded optimization: code generation for fast real-time optimization + ROS support

  • embedded-optimization
  • nonconvex
  • model-predictive-control
  • rust-library

A Swift micro library for generating Sunrise and Sunset times on device, requiring no network access.

  • swift
  • sunrise
  • sunset
  • ios

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

  • sequence-alignment
  • edit-distance
  • levehnstein-distance
  • library

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

  • histopathology-images
  • microscopy
  • sliding-windows
  • medical-image-analysis

Large collection of number systems providing custom arithmetic for mixed-precision algorithm development and optimization for AI, Machine Learning, Computer Vision, Signal Processing, CAE, EDA, control, optimization, estimation, and approximation.

  • arithmetic
  • integer-arithmetic
  • fixed-point-arithmetic
  • rational-arithmetic

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

PyKEP is a scientific library providing basic tools for research in interplanetary trajectory design.

  • interplanetary
  • mission-analysis
  • astrodynamics
  • aerospace

Universal cheminformatics toolkit, utilities and database search tools

Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

  • hubmap
  • imaging
  • openmicroscopy
  • ome-tiff