Segment Anything in Medical Images
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Genome modeling and design across all domains of life
Official repository for the Boltz biomolecular interaction models
- binding-prediction
- drug-discovery
- protein-structure
Eclipse SUMO is an open source, highly portable, microscopic and continuous traffic simulation package designed to handle large networks. It allows for intermodal simulation including pedestrians and comes with a large set of tools for scenario creation.
- traffic
- simulation
- transport
A Python toolbox for performing gradient-free optimization
N-D labeled arrays and datasets in Python
Biomni: a general-purpose biomedical AI agent
C++ implementation of the Python Numpy library
- python
- numpy
- c-plus-plus
- numerical-analysis
Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.
- mesa
- agent-based-modeling
- agent-based-simulation
- simulation-framework
Solving the Traveling Salesman Problem using Self-Organizing Maps
- self-organizing-map
- som
- tsp
- tsp-problem
3D visualization and mesh analysis for science and engineering
- vtk
- python
- visualization
- 3d
A fast and flexible implementation of Rigid Body Dynamics algorithms and their analytical derivatives
- robotics
- dynamics
- analytical-derivatives
- kinematics
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
- tensorflow
- deep-neural-network
- genomics
- science
Python library for loading and using triangular meshes.
- mesh
- triangular-meshes
- geometry
- python
A python CAD programming library
The official sources for the RDKit library
- cheminformatics
- c-plus-plus
- python
- rdkit
Bayesian optimization in PyTorch
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
- python
- neuroscience
- electroencephalography
- magnetoencephalography
PennyLane is an open-source quantum software platform for quantum computing, quantum machine learning, and quantum chemistry. Create meaningful quantum algorithms, from inspiration to implementation.
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
- pytorch
- protein-structure
- alphafold2
Massively parallel rigidbody physics simulation on accelerator hardware.
This repository includes the official project of TransUNet, presented in our paper: TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation.
Multi-language suite for high-performance solvers of differential equations and scientific machine learning (SciML) components. Ordinary differential equations (ODEs), stochastic differential equations (SDEs), delay differential equations (DDEs), differential-algebraic equations (DAEs), and more in Julia.
- differential-equations
- differentialequations
- julia
- ode
Tool for robust segmentation of >100 important anatomical structures in CT and MR images