Automated 3D cell detection in very large images
- microscopy
- cell-detection
- deep-learning
- image-analysis
Repository Index
81,588 visible repositories in the index
49–72 of 74 · Most stars
Graph-based molecule modeling toolkit for cheminformatics
- cheminformatics
- molecular-modeling
- chemistry
- toolkit
A formalization of geometry in Coq based on Tarski's axiom system
A Network Integration Approach for Drug-Target Interaction Prediction
Multi-dimensional Swift math
- math
- swift
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
- cellprofiler-analyst
- cellprofiler
- image-analysis
- machine-learning
A python Two Source Energy Balance model for estimation of evapotranspiration with remote sensing data
- source-energy-balance
- canopy
- soil
- radiometric-temperatures
🏃 The go-to single-cell Foundation Model
- batch-correction
- cell-biology
- celltype-annotation
- denoising
TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524
- self-attention
- compound-protein-interaction
- transformercpi
- structure-free-virtual-sreening
Interpretable bilinear attention network with domain adaptation improves drug-target prediction.
Auto-QChem is an automated workflow for the generation and storage of DFT calculations for organic molecules.
- cheminformatics
- dft-calculations
- automation
- feature
hsolve：电磁仿真大规模非正定厄密特征值求解。Certified shift-invert eigensolver for large sparse Hermitian (indefinite, generalized) eigenproblems from EM simulation: MUMPS LDLᵀ + block Krylov-Schur + Sylvester-inertia completeness certificate.
- computational-electromagnetics
- cpp17
- eigensolver
- eigenvalues
BulkFormer: A large-scale foundation model for human bulk transcriptomes
NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions
- computational-biology
- bioinformatics
- graph-convolution
- deep-learning
An Elixir implementation of the CONREC algorithm for topographic or isochrone maps.
- gis
- conrec
- map
- elixir
Generic, zero-alloc, 100%-test covered Quadtree for golang
- golang-library
- quadtree
- data-structures
- generics
WebGL molecule viewer made with Babylon.js
Generic 2D grid
- astar-algorithm
- dda-algorithm
- dejkstra
- golang
Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.
- microscopy
- image-processing
- segmentation
- biology
ODE system solver made simple. For IVPs (initial value problems).
- runge-kutta-fehlberg
- runge-kutta
- simulation
- ode-solver
An effort to consolidate the needs and plans of individuals and organizations using Common Lisp to meet their numerical and scientific computing needs.
Node-RED nodes for The Weather Company and Weather Underground Personal Weather Station APIs
Histology Topography Cytometry Analysis Toolbox
This is a class module in beta state to implement computations with large integers and reals/rationals numbers, while proposing representation of numerical values as scientific notation, allowing to obtain several cohorts for the same number (a lot of fun!).
- arithmetic
- biginteger
- biginteger-library
- fractional