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Tags: Graphics and 3D
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HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.

Fungal Feature Tracker (FFT): A tool to quantitatively characterize morphology and growth of filamentous fungi

A Python package to analyze matrix fiber orientation and intensity around cells as a proxy for cellular forces. Also measures alignment relative to X/Y axes, points and lines, with optional masks, a Python API and browser tools for analysis and group comparisons.

  • imaging
  • microscopy
  • contractility
  • collagen

QuimP is software for tracking cellular shape changes and dynamic distributions of fluorescent reporters at the cell membrane.

  • cell
  • motility
  • segmentation
  • imagej

🔬Python package for high-throughput single-cell imaging analysis.

  • microscopy-image-analysis
  • single-cell-analysis

Create Bitmap files using the V programming language

  • vlang
  • vlang-package