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This repo offers a simple interface that helps you to read&summerize research papers in pdf format. You can ask some questions after reading. This interface is developed based on openai API and using GPT-3.5-turbo model.

Translated📚 WeChat Reading (微信读书) lossless full-book export tool — one-click export of dual-font, finely typeset PDF / EPUB / plain Markdown notes (compatible with Obsidian & Notion), solving the problem of missing characters when turning pages on the web version.

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

  • deep-learning
  • protein-sequences
  • protein-structure
  • semi-supervised-learning

An open library for the analysis of molecular dynamics trajectories

  • molecular-dynamics
  • python
  • mdtraj
  • rmsd

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

  • calcium-imaging
  • deconvolution
  • source-extraction
  • motion-correction