Repository Index

code to run sei and obtain sei and sequence class predictions

Structural variant detection and association testing

A .NET library that provides fast, accurate and automatic differentiation (computes derivative / gradient) of mathematical functions.

• mathematical-modelling
• automatic-differentiation
• mathematics
• math

Rails frontend to The Genome Institute's drug gene interaction database.

Detecting cancers on mobile phones

PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbations at bulk and single-cell levels.

🔟 Implementation of rational number arithmetic for .NET with arbitrary precision.

• arbitrary-precision
• biginteger
• bigrational
• c-sharp

A math and collisions library for Lua.

• math
• intersection
• lua

Toolbox for the analysis of smFISH images.

• pattern-classification
• rna-localization
• segmentation
• smfish

python functions for simulating optical transfer functions

• microscopy
• numpy

Variations on Kirby & Paris' hydra battles and other entertaining math in Coq (collaborative, documented, includes exercises) [maintainer=@Casteran]

• coq
• hydra-battles
• ordinal-notations
• formal-proofs

NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions

• computational-biology
• bioinformatics
• graph-convolution
• deep-learning

Fast detection of repackaged Android applications based on the comparison of resource files included into the package.

• android
• android-security
• repackaging-detection
• java

An ActionScript 3 Geometry Library

Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning with autoencoders

• epigenomics
• pattern-search
• data-visualization
• interactive-machine-learning

A command line weather app built using elixir

Lua package that includes functions for Fast Fourier Transformations.

The framework for quantification of neuronal anatomy

• neuroscience
• neuroanatomy-toolbox
• imagej
• imagej2

common lisp library providing common math functions used in games

Tool for precise, interactive, fast and scalable FISH spot detection

CGRs, molecules and reactions manipulation

A powerful library extending VBA with over 100 functions for math, stats, finance, and data manipulation. It supports matrix operations, and user-defined functions, enhancing automation and analysis within Microsoft Office and LibreOffice environments for data management, financial calculations, an more.

• equation-systems
• mathematical-expression-parser
• mathematical-expressions-evaluator
• determinant-calculation

Native Haxe functions for graphical linear algebra (à la GLM: https://github.com/g-truc/glm/tree/master/glm)

Graph Theory [maintainers=@chdoc,@damien-pous]

• coq
• graph-theory
• mathcomp
• docker-coq-action