Optax is a gradient processing and optimization library for JAX.
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CasADi is a symbolic framework for numeric optimization implementing automatic differentiation in forward and reverse modes on sparse matrix-valued computational graphs. It supports self-contained C-code generation and interfaces state-of-the-art codes such as SUNDIALS, IPOPT etc. It can be used from C++, Python, Matlab/Octave, Julia or Javascript
- optimization
- nonlinear
- derivatives
- code-generation
library for nonlinear optimization, wrapping many algorithms for global and local, constrained or unconstrained, optimization
Lightweight, general, scalable C++ library for finite element methods
- finite-elements
- high-order
- high-performance-computing
- parallel-computing
RNA-seq aligner
An open source mesh slicer framework for Unity3D Game Engine. Written in C#.
This package contains deep learning models and related scripts for RoseTTAFold
A python module for scientific analysis of 3D data based on VTK and Numpy
- 3d-graphics
- vtk
- 3d
- mesh
Source code of PyGAD, a Python 3 library for building the genetic algorithm and training machine learning algorithms (Keras & PyTorch).
- python
- genetic-algorithm
- optimization
- numpy
Dreeve is a self-hosted, open-source dashboard for your sports and fitness data
- self-hosted
- statistics
- strava
- fitness
Arbitrary-precision arithmetic library for PHP
- php
- arbitrary-precision
- biginteger
- bigdecimal
[Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/
- javascript
- cornerstone
- dicom
- medical-imaging
QuTiP: Quantum Toolbox in Python
- qutip
- python
- quantum-toolbox
- quantum
An implementation of chunked, compressed, N-dimensional arrays for Python.
- zarr
- ndimensional-arrays
- compressed
- python
Chai-1, SOTA model for biomolecular structure prediction
USD BRep is a standalone C++ and Python library for NURBS-based boundary representation (BRep) solid modeling
a Fast Fourier Transform (FFT) library that tries to Keep it Simple, Stupid
automatic differentiation made easier for C++
- automatic-differentiation
- auto-differentiation
- autodiff
- autodifferentiation
Weather in terminal, with ANSI colors and Unicode symbols
- weather
- terminal
- ansi
- unicode
LAPACK development repository
- linear-algebra
- lapack
- blas
- lapacke
SIMD-accelerated distances, dot products, matrix ops, geospatial & geometric kernels for 16 numeric types — from 6-bit floats to 64-bit complex — across x86, Arm, RISC-V, and WASM, with bindings for Python, Rust, C, C++, Swift, JS, and Go 📐
C# library for 2D/3D geometric computation, mesh algorithms, and so on. Boost license.
Code for the ProteinMPNN paper
Linear algebra, eigenvalues, FFT, Bessel, elliptic, orthogonal polys, geometry, NURBS, numerical quadrature, 3D transfinite interpolation, random numbers, Mersenne twister, probability distributions, optimisation, differential equations.
- scientific-computing
- linear-algebra
- differential-equations
- sparse-systems