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Tags: Science and math
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97–120 of 221 · Most stars

C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings

  • variant-calling
  • genomics
  • vcf-manipulation
  • genotyping

Spatial Single Cell Analysis in Python

  • single-cell-rna-seq
  • single-cell-genomics
  • spatial-transcriptomics
  • spatial-analysis

Large collection of number systems providing custom arithmetic for mixed-precision algorithm development and optimization for AI, Machine Learning, Computer Vision, Signal Processing, CAE, EDA, control, optimization, estimation, and approximation.

  • arithmetic
  • integer-arithmetic
  • fixed-point-arithmetic
  • rational-arithmetic

Advanced date, time and interval library for Java with sun/moon-astronomy and calendars like Chinese, Coptic, Ethiopian, French Republican, Hebrew, Hijri, Historic Christian, Indian National, Japanese, Julian, Korean, Minguo, Persian, Thai, Vietnamese

One open-source modeler for structures, heat and fluids, built from scratch in pure Rust: parametric part in, verified results out. Automatic all-hex and tet meshing, our own nonlinear implicit and explicit FEA, heat transfer and lattice Boltzmann CFD — every result checked against theory. For engineers and AI agents alike. Free, forever.

  • cae
  • cfd
  • computational-mechanics
  • explicit-dynamics

A library designed to ease geographic coordinate format conversions, and determine sun/moon information in C#

  • moon
  • coordinates
  • longitude
  • latitude

Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PLIP is a large-scale pre-trained model that can be used to extract visual and language features from pathology images and text description. The model is a fine-tuned version of the original CLIP model.

Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

  • hubmap
  • imaging
  • openmicroscopy
  • ome-tiff