SIMD enhanced Array operations
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Axon/Myelin segmentation using Deep Learning
- deep-learning
- machine-learning
- myelin
- axon
Clipping and geometric operations for spherical polygons.
- d3
- map
- polygon-clipping
- projection
Learning cell communication from spatial graphs of cells
- tensorflow
- gnn
- glm
- cvae
Coq Repository at Nijmegen [maintainers=@spitters,@VincentSe,@Lysxia]
- coq-library
- real-number
- coq
- coq-ci
:spider_web: Compute interesting points, areas, and volumes in simplex meshes of any dimension.
- mathematics
- python
- pypi
- voronoi-diagram
Syre workspace.
PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbations at bulk and single-cell levels.
The repository host gives no description.
Toolbox for the analysis of smFISH images.
- pattern-classification
- rna-localization
- segmentation
- smfish
The Configurable Math Library
- vector-math
- expression-template
- cplusplus-11
- graphics
slick is a simple to use polygon collision library inspired by bump.lua
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
- r
- neuroanatomy-toolbox
- cran
- neuron
A simple, lightweight spatial hash for Lua
MAT is library for working with multi-dimensional arrays which supports efficient interfacing to foreign and CUDA code. BLAS and CUBLAS bindings are available.
A matrix package for common lisp building on work by Mark Hoemmen, Evan Monroig, Tamas Papp and Rif.
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
- cell-annotation
- multiplexed-imaging
- mpif
An Erlang implementation of the R*-tree spacial data structure
common lisp library providing common math functions used in games
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
- minerva
- microscopy
- ome
- immunofluorescence
SIMD powered simple-math numerical operations on arrays for Common Lisp through CFFI [still experimental]
- lisp
- common-lisp
- scientific-computing
- simd
Tool for precise, interactive, fast and scalable FISH spot detection
Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics