Repository Index

D3 plugin which computes a treemap based on a Voronoi tesselation

• d3js
• dataviz
• part-to-whole

Multiresolution Adaptive Numerical Environment for Scientific Simulation

TranslatedAcademic research library for DSH — search, cite, approve imports, hand off notes. Also: a research literature library plugin for DeepSeek Harness: search papers, include sources, approve imports into the library, and hand off note leads to other plugins in the same session.

• academic
• agentero
• ai-agents
• citations

Code that makes the Iowa Environmental Mesonet run, or run into the ground.

• weather
• mesonet
• iowa

A C# DICOM Library

• dicom
• medical-physics
• radiology
• radiation-oncology

A Python interface to access neuroanatomical atlases

• neuroscience
• python
• microscopy
• registration

Open source tumor evidence matching for sequencing labs and hospitals without molecular tumor boards. Research prototype; oncologist review required.

• bioinformatics
• cancer-research
• computational-biology
• drug-repurposing

Trick Simulation Environment. Trick provides a common set of simulation capabilities and utilities to build simulations automatically.

The implementation code for "DAGAN: Deep De-Aliasing Generative Adversarial Networks for Fast Compressed Sensing MRI Reconstruction"

• generative-adversarial-network
• mri-reconstruction
• computer-vision
• deep-learning

Interoperable web-based DICOM slide microscopy viewer and annotation tool

• dicomweb
• oidc
• react
• digital-pathology

Schema and data analyzer for MongoDB written in Go.

• mongodb
• schema
• analysis
• nosql

Batched NVIDIA MotionBricks: generate the motion of hundreds of characters in one model call.

• character-animation
• crowd-simulation
• motion-generation
• motionbricks

TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524

• self-attention
• compound-protein-interaction
• transformercpi
• structure-free-virtual-sreening

Data visualisation web components for the life sciences.

• biohackeu21
• bioinformatics
• visualization
• webcomponents

⚡ Open-source software for deep learning-based digital pathology

• deep-learning
• machine-learning
• digital-pathology
• computational-pathology

A record player simulated from the groove up

Coq Repository at Nijmegen [maintainers=@spitters,@VincentSe,@Lysxia]

• coq-library
• real-number
• coq
• coq-ci

Layout algorithms for graphs and trees in pure Julia.

• graph-visualization

Accelerated tensor operations and dynamic neural networks based on reverse mode automatic differentiation for every device that can run Swift - from watchOS to Linux

• deep-learning
• deep-neural-networks
• gradient-descent
• automatic-differentiation

A .NET library that provides fast, accurate and automatic differentiation (computes derivative / gradient) of mathematical functions.

• mathematical-modelling
• automatic-differentiation
• mathematics
• math

TranslatedAntifouling coating evidence panel: formulation sandbox, route biofouling stress, literature bounds. Simulation ≠ measurement. Live: https://simulator.jassyhong.top

• biofouling
• formulation
• antifouling
• evidence-panel

A math and collisions library for Lua.

• math
• intersection
• lua

The Mines Java Toolkit

• geophysics
• scientific-computing
• visualization
• mines-java-toolkit

python functions for simulating optical transfer functions

• microscopy
• numpy