Vision-Language Pathology Foundation Model - Nature Medicine
- bioimage-analysis
- bioimage-informatics
- conch
- foundation-model
Repository Index
70,234 visible repositories in the index
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TranslatedRun the DeepSeek Harness AI agent natively on Android — no root, no Termux, extension center included
The repository host gives no description.
Graph-linked unified embedding for single-cell multi-omics data integration
- bioinformatics
- deep-learning
- single-cell
- single-cell-multiomics
Official repository for the ProteinGym benchmarks
- benchmark
- computational-biology
- protein
- protein-design
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
- bioinformatics
- taxonomy
- cross-platform
- lineage
Deep Learning Library for Single Cell Analysis
- deep-learning
- tensorflow
- instance-segmentation
- cell-biology
🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP)
- awesome
- biomedical
- text-mining
- information-extraction
Tools for computational pathology
- machine-learning
- digital-pathology
- computational-pathology
- biomedical-image-processing
A dependency-free cross-platform swiss army knife for PDB files.
- python
- protein
- pdb
- bioinformatics
Curated (meta)list of resources for Biology.
RFID-controlled musicplayer powered by ESP32
The repository host gives no description.
Multi-Omics Factor Analysis
- multi-omics
- factor-analysis
- mofa
ggplot2 tech themes, scales, and geoms
bioruby
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
- hubmap
- imaging
- openmicroscopy
- ome-tiff
面向中国医生与医学研究生的医学论文写作 Agent Skills：32 个技能覆盖 PubMed 文献检索、统计分析、中英写作、选刊投稿与审稿修回，适用于 Claude Code、Codex。Medical writing skills for Claude Code & Codex.
- academic-writing
- agent-skills
- biostatistics
- claude-code
A private YouTube client: self-hosted web version (one docker compose) and native apps for Android, Windows, macOS, Linux and iPad/iPhone. No Google account, no tracking. Not affiliated with YouTube or Google.
- invidious
- privacy
- self-hosted
- whisper-cpp
Use your phone's Face ID or fingerprint to approve sudo and unlock your Mac. QR pairing, encrypted BLE, Secure Enclave signing — keys never leave your phone. Works with iPhone, Android, Apple Watch, Wear OS, or any browser. No $199 Magic Keyboard needed.
- android
- biometrics
- kotlin
- mac-mini
Open Frontier Biomolecular Intelligence
Experimental open-source replacement PlayStation 2 BIOS for emulators. MIT licensed.
Native R and Python sample-deletion robustness for omics: candidate certificates, minimum deletion bounds, Bioconductor model refits and donor-level pseudobulk
- bioinformatics
- exact-optimization
- metabolomics
- paired-data
Schema and generated objects for biolink data model and upper ontology
- biolink
- monarchinitiative
- gene-ontology
- datamodel