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Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PLIP is a large-scale pre-trained model that can be used to extract visual and language features from pathology images and text description. The model is a fine-tuned version of the original CLIP model.
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
One open-source modeler for structures, heat and fluids, built from scratch in pure Rust: parametric part in, verified results out. Automatic all-hex and tet meshing, our own nonlinear implicit and explicit FEA, heat transfer and lattice Boltzmann CFD — every result checked against theory. For engineers and AI agents alike. Free, forever.
Cirno's Perfect Math Library: Just about everything you need for 2D/3D games. Hopefully.
The official implementation of 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction (ICLR 2023)
pyMOR - Model Order Reduction with Python
Produce a sharp image of a planetary system object (moon, sun, planets) from many seeing-affected frames according to the "lucky imaging" technique.
Collection of self-contained header-only libraries for C++17
Supernodal sparse direct solver. https://portal.nersc.gov/project/sparse/superlu/
The universe in numbers. Free, open-source calculators for everything countable.
Source code for "DeepDTA: deep drug-target binding affinity prediction"
GraphDTA: Predicting drug-target binding affinity with graph neural networks
A generic interface for the environmental perception of automated driving functions in virtual scenarios.
OpenAeroStruct is a lightweight tool that performs aerostructural optimization using OpenMDAO.
Native R and Python sample-deletion robustness for omics: candidate certificates, minimum deletion bounds, Bioconductor model refits and donor-level pseudobulk
City Energy Analyst (CEA) is an open-source urban building energy modeling (UBEM) platform and computation tool for the design of low-carbon and highly efficient cities.
formally verified category theory library
Schema and generated objects for biolink data model and upper ontology
RNA-seq prediction with deep convolutional neural networks.
Interactive 2D wave optics simulator. Turn any image into a refractive scene, add sources, watch waves refract, diffract and interfere. Probes, intensity maps, video export.
Bi-Directional Equivariant Long-Range DNA Sequence Modeling
Formal proof of the Four Color Theorem [maintainer=@ybertot]
The RAW Complex.js is a complex numbers library written in JavaScript
ChEMBL database structure pipelines