Repository Index

Data logistics system enabling real-time pathogen surveillance. Built for the Seattle Flu Study.

• postgres
• postgresql
• python
• infectious-disease

The repository host gives no description.

Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding

• autoencoder
• imputation
• integration
• multimodal

scPair: Boosting single cell multimodal analysis by leveraging single cell atlases and implicit feature selection

The repository host gives no description.

Interpretable modeling of cellular responses to drug perturbations using cycle consistence learning

Vendor-agnostic, FHIR-Genomics-aligned API contract for cross-vendor NGS interpretation. JSON Schema + TypeScript + Python pydantic.

DeepAEG: A model for predicting cancer drug response based on data enhancement and edge-collaborative update strategies

Python library for statistical analysis of mRNA and protein distributions in fluorescent microscopy images

Interpretable drug response prediction with graph neural networks over drugs, cell lines, and genes.

GNN-based gene-selection deep learning model for drug response prediction