Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
- minerva
- microscopy
- ome
- immunofluorescence
Repository Index
47,133 repositories indexed
145–168 of 188 · Most stars
High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
Methods for Image-Based Cell Profiling
Efficient and expressive arrayed vector math library with multi-threading and CUDA support in Common Lisp.
A powerful library extending VBA with over 100 functions for math, stats, finance, and data manipulation. It supports matrix operations, and user-defined functions, enhancing automation and analysis within Microsoft Office and LibreOffice environments for data management, financial calculations, an more.
- equation-systems
- mathematical-expression-parser
- mathematical-expressions-evaluator
- determinant-calculation
Common Lisp package for simple two dimensional computational geometry.
MCP server for spatial transcriptomics analysis through natural language interfaces.
- bioinformatics
- cell-communication
- deconvolution
- machine-learning
An arbitrary-precision decimal floating-point arithmetic package for Go
- decimal
- arbitrary-precision
- floating-point
- go
Portability Environment for Fortran poor people
- fortran
- codes-portability
- precision
A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources
- bioimage-analysis
- cell-classification
- computer-vision
- digital-pathology
2D triangulation library. Allows translating lines and polygons (both based on points) to the language of GPUs.
- triangulation
- computational-geometry
- golang
Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.
- alphafold3
- docking
- drug-design
- drug-discovery
A common lisp library that provides a numeric type with optional unit and/or uncertainty for computations with automatic error propagation.
Multi-platform quantum programming library, written in TypeScript, good for JS/NodeJS
- quantum-computing
- quantum-programming-language
- quantum
Qurry (was) a prototype for a functional quantum programming language. It incorporated many aspects of functional programming (Haskell, Clojure), but also took standard design philosophies from C++, Python, and other "traditional" languages. [category: quantum]
Collection of basic math routines in Ada
Generic 2D grid
- astar-algorithm
- dda-algorithm
- dejkstra
- golang
Single-cell fluorescence microscopy data analysis
- microscopy
- fluorescence-microscopy-imaging
Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.
- microscopy
- image-processing
- segmentation
- biology
Ruby client for interacting with the NASA (POWER) Agroclimatology Web Resource
- solar-radiation
- nasa
- agriculture
- ruby
A collection of general utility and mathematical functions for GameMaker Studio 2 (Version 2.3).
A matrix library for the MicroPython language
Ruby library for calculating reference crop evapotranspiration (ETo)
- agriculture
- evapotranspiration
- ruby