Repository Index

💬 Trace citation chains for any concept across research papers and render them as an interactive graph.

• academic-research
• bibliography
• citation-graph
• cli

A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources

• bioimage-analysis
• cell-classification
• computer-vision
• digital-pathology

Multidimensional array similar to NumPy and NArray

• matrix
• linear-algebra
• colt
• ruby

Partial Commutative Monoids

• partial-commutative-monoid
• separation-logic
• coq
• coq-library

Multi-platform quantum programming library, written in TypeScript, good for JS/NodeJS

• quantum-computing
• quantum-programming-language
• quantum

3D shape analysis using deep learning

• cancer-biology
• cell-biology
• deep-learning
• geometric-deep-learning

Qurry (was) a prototype for a functional quantum programming language. It incorporated many aspects of functional programming (Haskell, Clojure), but also took standard design philosophies from C++, Python, and other "traditional" languages. [category: quantum]

Generic 2D grid

• astar-algorithm
• dda-algorithm
• dejkstra
• golang

Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics

• bioinformatics
• cell-type-deconvolution
• computational-biology
• deconvolution

Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.

• microscopy
• image-processing
• segmentation
• biology

Nova DSO Tracker is an open-source Flask application for astrophotographers, providing real-time tracking of deep-sky objects' altitude, observability prediction, and integration with Stellarium and SIMBAD databases.

• astrophotography
• astronomy
• ephem
• flask

Data logistics system enabling real-time pathogen surveillance. Built for the Seattle Flu Study.

• postgres
• postgresql
• python
• infectious-disease

Ruby client for interacting with the NASA (POWER) Agroclimatology Web Resource

• solar-radiation
• nasa
• agriculture
• ruby

Coq formalization of algorithms due to Tarjan and Kosaraju for finding strongly connected graph components using Mathematical Components and SSReflect [maintainers=@CohenCyril,@palmskog]

• coq
• mathcomp
• ssreflect
• tarjan-algorithm

A flexible Julia toolkit for high-dimensional cellular profiles

• julia
• morphological-analysis
• high-content-screening

scPair: Boosting single cell multimodal analysis by leveraging single cell atlases and implicit feature selection

Games math library for D

• dlang
• math
• nogc

Astronomical FITS image analysis tool for detecting asteroids, comets, satellites, moving objects, and transients in astrophotography data.

• astronomy
• astronomy-software
• astrophotography
• moving-object-detection

Utility library to pretty print physical values in proper metric units

• ada2012
• ada
• utility-library
• formatting-output

Winner of the Golem Gitcoin Hackathon 2020 (https://blog.golemproject.net/meet-the-winners-golem-gitcoin-hackathon-2020/). This app lets people design, simulate, and analyse antenna arrays without the need to utilize commercial and expensive applications.

• golem

Simple webapp for generating small ligand conformers

• computational-biology
• computational-chemistry
• conformer-generation
• rdkit

XitoSBML - the spatial SBML plugin for ImageJ

• sbml
• systems-biology
• spatial-sbml-plugin
• imagej

Histology Topography Cytometry Analysis Toolbox

Caustic Elixir Cryptocurrency Library (Bitcoin, Ethereum, etc.) with extensive cryptography and number theory library