mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance
- qa
- mri
- neuroimaging
- niqc
Repository Index
47,133 repositories indexed
169–183 of 183 · Most stars
UV-first benchmark for protein-ligand docking with reproducible annotation, pocket similarity, and HPC workflows.
- benchmark
- bioinformatics
- cheminformatics
- computational-chemistry
A flexible Julia toolkit for high-dimensional cellular profiles
- julia
- morphological-analysis
- high-content-screening
Generative models for transcriptomic-driven or protein-driven molecular design (PaccMann^RL).
- deep-reinforcement-learning
- generative-model
- vae
- molecule-generation
Utility library to pretty print physical values in proper metric units
- ada2012
- ada
- utility-library
- formatting-output
DetecDiv provides a comprehensive set of tools to analyze time microscopy images using deep learning methods. The software structure is such that data can be processed either at the command line or using a graphical user-interface. Detecdiv classification models include : image classification and regression, semantic segmentation, LSTM networks to analyze data and image timeseries.
Analysis of cell migration in Igor Pro
- igor
- imagej
- cell-migration
- tracking
Winner of the Golem Gitcoin Hackathon 2020 (https://blog.golemproject.net/meet-the-winners-golem-gitcoin-hackathon-2020/). This app lets people design, simulate, and analyse antenna arrays without the need to utilize commercial and expensive applications.
- golem
Extra contribution for mathcomp
- theorem-proving
- primality-test
- matroid
- rsa-algorithm
Formal proof in Coq of Puiseux's Theorem.
This is a class module in beta state to implement computations with large integers and reals/rationals numbers, while proposing representation of numerical values as scientific notation, allowing to obtain several cohorts for the same number (a lot of fun!).
- arithmetic
- biginteger
- biginteger-library
- fractional
legacy signal processing leveraging afni, ants, fsl, nipy, robex, and wavelet toolbox - brnfswdktm
- fmri-preprocessing
- fmri
A common interface used for modeling Mathematical Programs (e.g., Convex Optimization problems) in the language Go (Golang).
- convex-optimization
- linear-programming
- optimization
- quadratic-programming
Python library for statistical analysis of mRNA and protein distributions in fluorescent microscopy images
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- ama
- physics
- programming
- parent