An open-source mathematical tire modelling library
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A set of protocols for Arithmetic, Statistics and Logical operations
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
- cell-annotation
- multiplexed-imaging
- mpif
The framework for quantification of neuronal anatomy
- neuroscience
- neuroanatomy-toolbox
- imagej
- imagej2
Classification and Gradient-based Localization of Chest Radiographs using PyTorch.
- fine-tuning
- vgg16
- resnet18
- densenet121
Elixir library implementing a parallel matrix multiplication algorithm and other utilities for working with matrices. Used for benchmarking computationally intensive concurrent code.
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
- minerva
- microscopy
- ome
- immunofluorescence
High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
SIMD powered simple-math numerical operations on arrays for Common Lisp through CFFI [still experimental]
- lisp
- common-lisp
- scientific-computing
- simd
Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
Tiny header-only C++17 library for lat/lng geometry: distance, bearing, area, point-in-polygon and path proximity
- cpp
- geometry
- geospatial
- gis
An extensible .NET genetic algorithm library for optimization and artificial intelligence - Evolutionary computation and complex problem solving made simple
- artificial-intelligence
- csharp
- dotnet
- evolutionary-algorithm
A powerful library extending VBA with over 100 functions for math, stats, finance, and data manipulation. It supports matrix operations, and user-defined functions, enhancing automation and analysis within Microsoft Office and LibreOffice environments for data management, financial calculations, an more.
- equation-systems
- mathematical-expression-parser
- mathematical-expressions-evaluator
- determinant-calculation
Native Haxe functions for graphical linear algebra (à la GLM: https://github.com/g-truc/glm/tree/master/glm)
MCP server for spatial transcriptomics analysis through natural language interfaces.
- bioinformatics
- cell-communication
- deconvolution
- machine-learning
Prime numbers for Coq
- coq
- theorem-proving
- elliptic-curves
- prime-numbers
Predicting Cell Health with Morphological Profiles
- carpenter-lab
- morphological-profiling
- crispr
- cell-painting
A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources
- bioimage-analysis
- cell-classification
- computer-vision
- digital-pathology
Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.
- alphafold3
- docking
- drug-design
- drug-discovery
A common lisp library that provides a numeric type with optional unit and/or uncertainty for computations with automatic error propagation.
NASA/JPL SPICE Toolkit for C – patched for cross-platform compatibility
- astronomy
- astronomical-algorithms
- celestial-mechanics
- nasa
Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network
Small size matrix handling module with a few linear algebra operations specifically for MicroPython (Python3)
DE-9IM spatial predicate library implemented in Javascript.
- de-9im
- spatial
- predicates
- javascript