PyTorch Connectomics: segmentation toolbox for EM connectomics
- computer-vision
- neuroscience
- connectomics
- pytorch
Repository Index
47,133 repositories indexed
193–216 of 345 · Most stars
Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
- cancer-imaging-research
- radiomics
- radiomics-features
- machine-learning
Probabilistic cell segmentation for in situ spatial transcriptomics
Code that makes the Iowa Environmental Mesonet run, or run into the ground.
- weather
- mesonet
- iowa
Practical volume computation and sampling in high dimensions
- geometry
- statistics
- polyhedral-computations
- random-walk
Associated Repository for "Translation between Molecules and Natural Language"
Fast Math Library for Delphi
- delphi-rtl
- delphi-fastmath
- fastmath
- overloaded-operators
A collection of useful mathematical functions in Elixir with a slant towards statistics, linear algebra and machine learning
Wrapper for RDKit's RunReactants to improve stereochemistry handling
scPerturb: A resource and a python/R tool for single-cell perturbation data
- cite-seq
- database
- perturbation
- scatac-seq
A Python interface to access neuroanatomical atlases
- neuroscience
- python
- microscopy
- registration
The official NFFT library repository
- nfft
- fftw
- fourier-transform
- c
AI-based pathology predicts origins for cancers of unknown primary - Nature
- histology
- pathology
- wsi-images
- histopathology
Simple RDKit molecule editor GUI using PySide
Dlang Core Library
- ndslice
- iterator
- range
- algorithms
Trick Simulation Environment. Trick provides a common set of simulation capabilities and utilities to build simulations automatically.
An automatic code generator for nonlinear model predictive control (NMPC) and the continuation/GMRES method (C/GMRES) based numerical solvers for NMPC
- model-predictive-control
- nonlinear-model-predictive-control
- mpc
- nmpc
Repository for Nicheformer: a foundation model for single-cell and spatial omics
Python package for calculating reference/potential evapotranspiration (ETo).
Interoperable web-based DICOM slide microscopy viewer and annotation tool
A script to run structural alerts using the RDKit and ChEMBL
A Geometry library for Elixir that calculates spatial relationships between two geometries
- spatial-analysis
- geospatial
- gis
- geometry
The V Tensor Library
- v
- hacktoberfest
- autograd
- deep-learning
A python Two Source Energy Balance model for estimation of evapotranspiration with remote sensing data
- source-energy-balance
- canopy
- soil
- radiometric-temperatures