Repository Index

The fundamental package for scientific computing with Python.

• numpy
• python

AI Toolkit for Healthcare Imaging

• healthcare-imaging
• deep-learning
• medical-image-computing
• medical-image-processing

Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more

• go
• golang
• scientific-computing
• data-analysis

Qiskit is an open-source SDK for working with quantum computers at the level of extended quantum circuits, operators, and primitives.

• quantum-computing
• qiskit
• sdk
• quantum-programming-language

Efficiently computes derivatives of NumPy code.

• autograd
• automatic-differentiation
• numpy
• python

Draco is a library for compressing and decompressing 3D geometric meshes and point clouds. It is intended to improve the storage and transmission of 3D graphics.

• point-cloud
• 3d-graphics
• compression
• mesh

A Python-embedded modeling language for convex optimization problems.

• python
• cvxpy
• optimization
• modeling-language

The public CGAL repository, see the README below

• cgal
• c-plus-plus
• geometry
• algorithms

The Rocq Prover is an interactive theorem prover, or proof assistant. It provides a formal language to write mathematical definitions, executable algorithms and theorems together with an environment for semi-interactive development of machine-checked proofs.

• proof-assistant
• coq
• theorem-proving
• dependent-types

A PyTorch Library for Accelerating 3D Deep Learning Research

• pytorch
• 3d-deep-learning
• neural-networks
• differentiable-rendering

Python framework for creating, editing, and running Noisy Intermediate-Scale Quantum (NISQ) circuits.

• nisq
• quantum-algorithms
• quantum-computing
• cirq

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

• nci-itcr
• nci-qin
• quantitative-imaging
• imaging-informatics

Eclipse SUMO is an open source, highly portable, microscopic and continuous traffic simulation package designed to handle large networks. It allows for intermodal simulation including pedestrians and comes with a large set of tools for scenario creation.

• traffic
• simulation
• transport

Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.

• mesa
• agent-based-modeling
• agent-based-simulation
• simulation-framework

A Laravel package to retrieve pageviews and other data from Google Analytics

• laravel
• php
• analytics
• google

Multi-language suite for high-performance solvers of differential equations and scientific machine learning (SciML) components. Ordinary differential equations (ODEs), stochastic differential equations (SDEs), delay differential equations (DDEs), differential-algebraic equations (DAEs), and more in Julia.

• differential-equations
• differentialequations
• julia
• ode

Public development project of the LAMMPS MD software package

• molecular-dynamics
• lammps
• simulation
• kokkos

Multi-platform, free open source software for visualization and image computing.

• medical-imaging
• vtk
• itk
• python

Message Passing Neural Networks for Molecule Property Prediction

• machine-learning
• chemistry
• neural-networks
• drug-discovery

PyWavelets - Wavelet Transforms in Python

• wavelets
• wavelet-transform
• signal-processing
• image-processing

CasADi is a symbolic framework for numeric optimization implementing automatic differentiation in forward and reverse modes on sparse matrix-valued computational graphs. It supports self-contained C-code generation and interfaces state-of-the-art codes such as SUNDIALS, IPOPT etc. It can be used from C++, Python, Matlab/Octave, Julia or Javascript

• optimization
• nonlinear
• derivatives
• code-generation

This package contains deep learning models and related scripts for RoseTTAFold

[Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/

• javascript
• cornerstone
• dicom
• medical-imaging

Computational Geometry Unity library with implementations of intersection algorithms, triangulations like delaunay, voronoi diagrams, polygon clipping, bezier curves, ear clipping, convex hulls, mesh simplification, etc

• unity3d
• computational-geometry
• voronoi
• intersections