Image analysis and comparison
Repository Index
47,133 repositories indexed
1–24 of 25 · Most stars
3D visualization and mesh analysis for science and engineering
- vtk
- python
- visualization
- 3d
PyGraphistry is a Python library to quickly load, shape, embed, and explore big graphs with the GPU-accelerated Graphistry visual graph analyzer
- graph
- visualization
- gpu
- graphistry
A python module for scientific analysis of 3D data based on VTK and Numpy
- 3d-graphics
- vtk
- 3d
- mesh
cuGraph - RAPIDS Graph Analytics Library
Leptonica is an open source library containing software that is broadly useful for image processing and image analysis applications. The official github repository for Leptonica is: danbloomberg/leptonica. See leptonica.org for more documentation.
An open-source application for biological image analysis
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
- calcium-imaging
- deconvolution
- source-extraction
- motion-correction
cell detection in calcium imaging recordings
- imaging
- neuroscience
- data-analysis
a generic C++ library for image analysis
Open source math and physics engine that executes MATLAB-syntax code. Features a modern compiler, automatic GPU acceleration for large calculations, and support for math on geometry / FEA calculations.
- matlab
- rust
- jit-compiler
- linear-algebra
TrackMate is your buddy for your everyday tracking.
- image-analysis
- single-particle-tracking
- fiji-plugin
Allocators, I/O streams, math, geometry, image and audio processing for D
- utility-library
- dlang
- linear-algebra
- computational-geometry
Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.
- python
- microscopy
- scripting
- automation
Collection of mathematical morphology methods and plugins for ImageJ
- image-processing
- image-analysis
- imagej
- fiji
Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
- biology
- fluorescence
- image-analysis
- image-processing
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
- r
- neuroanatomy-toolbox
- cran
- neuron
:art: Image processing toolbox for R
- r
- bioinformatics
- image-processing
- image-analysis
Go's answer to pandas + scikit-learn: a batteries-included data analysis library with dataframes, statistics, machine learning, quant, and GPU acceleration. Run Python with seamless two-way variable sharing, or explore data straight from the Insyra CLI.
HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.
- image-processing
- images
- image-analysis
- deep-learning
3D shape analysis using deep learning
- cancer-biology
- cell-biology
- deep-learning
- geometric-deep-learning
Plugins for bone image analysis
- fiji-plugin
- image-analysis
- image-processing
- imagej-plugins
Lattice light-sheet post-processing utility.
- microscopy
- light-sheet
- image-processing
- image-analysis
Modular image and object analysis workflows for ImageJ/Fiji
- fiji-plugin
- modular
- imagej
- image-processing