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Suite of tools for deploying and training deep learning models using the JVM. Highlights include model import for keras, tensorflow, and onnx/pytorch, a modular and tiny c++ library for running math code and a java based math library on top of the core c++ library. Also includes samediff: a pytorch/tensorflow like library for running deep learn...
Powerful modern math library for PHP: Features descriptive statistics and regressions; Continuous and discrete probability distributions; Linear algebra with matrices and vectors, Numerical analysis; special mathematical functions; Algebra
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.
Benchmarks for generative chemistry
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
Official repository for the ProteinGym benchmarks
The fastest automatic differentiation library for C++, with Python bindings. Forward, adjoint and higher-order derivatives, checkpointing, Eigen support and JIT. Reproducible benchmarks against CppAD, Adept and autodiff.
Benchmarking analysis of data integration tools
Ark -- Archetype-based Entity Component System (ECS) for Go.
A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.
An ESP32 and 4.2" ePaper Display reads Dark Sky weather API and displays the weather using ESP-IDF
Astrophotography capture and processing
Integrated pipeline for multiplexed image analysis
MikuAuahDark's Various Lua Libraries
A matrix package for common lisp building on work by Mark Hoemmen, Evan Monroig, Tamas Papp and Rif.
Elixir library implementing a parallel matrix multiplication algorithm and other utilities for working with matrices. Used for benchmarking computationally intensive concurrent code.
Updated infix.cl of the CMU AI repository, originally written by Mark Kantrowitz
Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.
Collection of basic math routines in Ada
UV-first benchmark for protein-ligand docking with reproducible annotation, pocket similarity, and HPC workflows.
2d Vector for Haxe
A Darksky.net (formerly forecast.io) weather API client for Elixir