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Querybook is a Big Data Querying UI, combining collocated table metadata and a simple notebook interface.

  • metastore
  • analyses
  • hive
  • presto

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

  • deep-learning
  • protein-sequences
  • protein-structure
  • semi-supervised-learning

AgML is a centralized framework for agricultural machine learning. AgML provides access to public agricultural datasets for common agricultural deep learning tasks, with standard benchmarks and pretrained models, as well the ability to generate synthetic data and annotations.

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

  • protein
  • protein-sequences
  • protein-design
  • representation-learning