Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
- rna-seq-data
- gene-expression
- scrna-seq-data
- bioinformatics
Repository Index
59,621 visible repositories in the index
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Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome
- cancer-genomics
- cnv-detection
- single-cell
- phylogeny
scPerturb: A resource and a python/R tool for single-cell perturbation data
- cite-seq
- database
- perturbation
- scatac-seq
Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.
Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
- single-cell
- scrna-seq
- scatac-seq
- deep-neural-networks