Repository Index

A Cloud Native Batch System (Project under CNCF)

• batch-systems
• kubernetes
• golang
• hpc

A collection of GICP-based fast point cloud registration algorithms

• point-cloud
• pcl
• gicp
• icp

Cloud-native genomic dataframes and batch computing

• genetics
• vcf
• genomics
• gwas

A Swift micro library for generating Sunrise and Sunset times on device, requiring no network access.

• swift
• sunrise
• sunset
• ios

Reference mapping for single-cell genomics

• single-cell
• deep-learning
• rna-seq-analysis
• data-integration

One open-source modeler for structures, heat and fluids, built from scratch in pure Rust: parametric part in, verified results out. Automatic all-hex and tet meshing, our own nonlinear implicit and explicit FEA, heat transfer and lattice Boltzmann CFD — every result checked against theory. For engineers and AI agents alike. Free, forever.

• cae
• cfd
• computational-mechanics
• explicit-dynamics

Interactive 2D wave optics simulator. Turn any image into a refractive scene, add sources, watch waves refract, diffract and interfere. Probes, intensity maps, video export.

Open source tumor evidence matching for sequencing labs and hospitals without molecular tumor boards. Research prototype; oncologist review required.

• bioinformatics
• cancer-research
• computational-biology
• drug-repurposing

🏃 The go-to single-cell Foundation Model

• batch-correction
• cell-biology
• celltype-annotation
• denoising

Accelerated tensor operations and dynamic neural networks based on reverse mode automatic differentiation for every device that can run Swift - from watchOS to Linux

• deep-learning
• deep-neural-networks
• gradient-descent
• automatic-differentiation

Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.

• alphafold3
• docking
• drug-design
• drug-discovery

NASA/JPL SPICE Toolkit for C – patched for cross-platform compatibility

• astronomy
• astronomical-algorithms
• celestial-mechanics
• nasa

A dependency-free Linear Algebra, Statistics, and Machine Learning library written from scratch in V

• ml
• statistics
• v