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Suite of tools for deploying and training deep learning models using the JVM. Highlights include model import for keras, tensorflow, and onnx/pytorch, a modular and tiny c++ library for running math code and a java based math library on top of the core c++ library. Also includes samediff: a pytorch/tensorflow like library for running deep learn...
OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.
Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.
A python module for scientific analysis of 3D data based on VTK and Numpy
USD BRep is a standalone C++ and Python library for NURBS-based boundary representation (BRep) solid modeling
A collection of GICP-based fast point cloud registration algorithms
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)
A Euclidean diffusion model for structure-based drug design.
Ark -- Archetype-based Entity Component System (ECS) for Go.
Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. The name Kaapana comes from the Hawaiian word kaʻāpana, meaning "distributor" or "part".
Graph-based molecule modeling toolkit for cheminformatics
D3 plugin which computes a treemap based on a Voronoi tesselation
A formalization of geometry in Coq based on Tarski's axiom system
AI-based pathology predicts origins for cancers of unknown primary - Nature
An automatic code generator for nonlinear model predictive control (NMPC) and the continuation/GMRES method (C/GMRES) based numerical solvers for NMPC
Interoperable web-based DICOM slide microscopy viewer and annotation tool
TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524
Chemical 2D structure editor application/applet based on the Chemistry Development Kit
⚡ Open-source software for deep learning-based digital pathology
Python package for image-based profiling
CASSIA: A Multi-Agent LLM-Based Single-Cell Cell Type Annotation Framework
Accelerated tensor operations and dynamic neural networks based on reverse mode automatic differentiation for every device that can run Swift - from watchOS to Linux
A handy calculator, based on Rust and WebAssembly.