:neckbeard: Vim notebook cell bindings for JupyterLab
- vim
- jupyterlab-vim
- jupyterlab-extension
- jupyterlab
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Break the linear presentation of Jupyter Notebooks with sticky cells!
Visualize Python code execution (line-by-line) in Jupyter Notebook cells.
manim cell magic for IPython/Jupyter to show the output video
- jupyter-magic
- jupyer
- manim
- ipython-magic
Cell-by-cell testing for production Jupyter notebooks in JupyterLab
Cell and line magic for PGF/TikZ-to-SVG rendering in Jupyter notebooks
Jupyterlab extension to show notebook cell completion notifications
- jupyter
- jupyterlab
- browser-notifications
- jupyterlab-extension
MCP server for spatial transcriptomics analysis through natural language interfaces.
- bioinformatics
- cell-communication
- deconvolution
- machine-learning
CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer
- cancer
- foundation-model
- single-cell
Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network
Single-cell fluorescence microscopy data analysis
- microscopy
- fluorescence-microscopy-imaging
A simple helper library with 2 NBConvert exporters for PDF/HTML export with no code cells
- jupyterlab
- jupyter
- python
- nbconvert
Neovim plugin that launches a Jupyter/IPython console in a split to run files, lines, and Spyder‑IDE‑style runcells, with a ZMQ‑powered variable explorer and data viewer.
- ipython
- jupyter
- spyder-ide
- variable-explorer
Human Protein Atlas image classification competition
Interpretable drug response prediction with graph neural networks over drugs, cell lines, and genes.