Multi-Joint dynamics with Contact. A general purpose physics simulator.
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Burn is a next generation tensor library and Deep Learning Framework that doesn't compromise on flexibility, efficiency and portability.
- autodiff
- deep-learning
- machine-learning
- rust
SciPy library main repository
- python
- scipy
- algorithms
- closember
Open source code for AlphaFold 2.
Suite of tools for deploying and training deep learning models using the JVM. Highlights include model import for keras, tensorflow, and onnx/pytorch, a modular and tiny c++ library for running math code and a java based math library on top of the core c++ library. Also includes samediff: a pytorch/tensorflow like library for running deep learn...
- java
- gpu
- deeplearning
- neural-nets
Open3D: A Modern Library for 3D Data Processing
- mesh-processing
- computer-graphics
- opengl
- cpp
CUDA Templates and Python DSLs for High-Performance Linear Algebra
- cuda
- deep-learning
- deep-learning-library
- cpp
PyTorch3D is FAIR's library of reusable components for deep learning with 3D data
AI Toolkit for Healthcare Imaging
- healthcare-imaging
- deep-learning
- medical-image-computing
- medical-image-processing
AlphaFold 3 inference pipeline.
Efficiently computes derivatives of NumPy code.
- autograd
- automatic-differentiation
- numpy
- python
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
- drug-discovery
- quantum-chemistry
- deep-learning
- biology
The public CGAL repository, see the README below
- cgal
- c-plus-plus
- geometry
- algorithms
The Rocq Prover is an interactive theorem prover, or proof assistant. It provides a formal language to write mathematical definitions, executable algorithms and theorems together with an environment for semi-interactive development of machine-checked proofs.
- proof-assistant
- coq
- theorem-proving
- dependent-types
Official git repository for Biopython (originally converted from CVS)
- python
- bioinformatics
- genomics
- biopython
A PyTorch Library for Accelerating 3D Deep Learning Research
- pytorch
- 3d-deep-learning
- neural-networks
- differentiable-rendering
Official repository for the Boltz biomolecular interaction models
- binding-prediction
- drug-discovery
- protein-structure
PennyLane is an open-source quantum software platform for quantum computing, quantum machine learning, and quantum chemistry. Create meaningful quantum algorithms, from inspiration to implementation.
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
- pytorch
- protein-structure
- alphafold2
Plan, apply and roll back changes to a production ontology, with a blast radius report and a proof an auditor can re-check.
- ai-native
- description-logics
- knowledge-graph
- mcp
Optax is a gradient processing and optimization library for JAX.
This package contains deep learning models and related scripts for RoseTTAFold
Source code of PyGAD, a Python 3 library for building the genetic algorithm and training machine learning algorithms (Keras & PyTorch).
- python
- genetic-algorithm
- optimization
- numpy
[Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/
- javascript
- cornerstone
- dicom
- medical-imaging