Tools for computational pathology
- machine-learning
- digital-pathology
- computational-pathology
- biomedical-image-processing
Repository Index
47,133 repositories indexed
1–8 of 8 · Most stars
Image restoration for fluorescence microscopy
Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
- biology
- fluorescence
- image-analysis
- image-processing
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
- minerva
- microscopy
- ome
- immunofluorescence
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
- stitching
- microscopy
- microscopy-images
- fluorescence-microscopy-imaging
Single-cell fluorescence microscopy data analysis
- microscopy
- fluorescence-microscopy-imaging
An interactive image processing program for biologists written in Python.
- biologists
- python
- imagej
- calcium
gateway for segmentation data to Rstats & visualization with ggplot2 - in development
- visualization
- fluorescence-data
- ggplot