Suite of tools for deploying and training deep learning models using the JVM. Highlights include model import for keras, tensorflow, and onnx/pytorch, a modular and tiny c++ library for running math code and a java based math library on top of the core c++ library. Also includes samediff: a pytorch/tensorflow like library for running deep learn...
A Python-embedded modeling language for convex optimization problems.
Official repository for the Boltz biomolecular interaction models
- binding-prediction
- drug-discovery
- protein-structure
Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.
- mesa
- agent-based-modeling
- agent-based-simulation
- simulation-framework
Model-rocketry aerodynamics and trajectory simulation software
- aerospace
- flight-simulator
- java
- modeling
High-performance C++ library for multiphysics and multibody dynamics simulations
This package contains deep learning models and related scripts for RoseTTAFold
Chai-1, SOTA model for biomolecular structure prediction
USD BRep is a standalone C++ and Python library for NURBS-based boundary representation (BRep) solid modeling
The Control Toolbox - An Open-Source C++ Library for Robotics, Optimal and Model Predictive Control
- optimal-control
- model-predictive-control
- ilqr
- ilqg
Deep probabilistic analysis of single-cell and spatial omics data
- scrna-seq
- variational-bayes
- variational-autoencoder
- cite-seq
The repository host gives no description.
- foundation-model
- gpt
- single-cell
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
Biological foundation modeling from molecular to genome scale
Open-source GNSS + inertial navigation, sensor fusion simulator. Motion trajectory generator, sensor models, and navigation
- inertial-navigation-systems
- gnss
- gps
- imu
Owl - OCaml Scientific Computing @ https://ocaml.xyz
Gazebo database of SDF models. This is a predecessor to https://app.gazebosim.org
ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.
Official Repository for the Uni-Mol Series Methods
A lean C++ library for working with point cloud data
- point-cloud
- icp
- ransac
- convex-hull
WebGL accelerated JavaScript molecular graphics library
Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models
Foundation Models for Genomics & Transcriptomics