Repository Index

Cleanlab's open-source library is the standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.

• weak-supervision
• data-cleaning
• data-quality
• noisy-labels

Open source annotation tool for machine learning practitioners.

• natural-language-processing
• machine-learning
• annotation-tool
• python

Collaborate & label any type of data, images, text, or documents, in an easy web interface or desktop app.

• computer-vision
• annotate-images
• entity-recognition
• desktop

🔧 A curated list of awesome dataset tools

• datasets
• awsome
• awsome-list
• machine-learning

:christmas_tree:Visualization and annotation of phylogenetic trees

• r
• visualization
• phylogenetic-trees
• annotations

Use d3-annotation with built-in annotation types, or extend it to make custom annotations. It is made for d3-v4 in SVG.

• annotations
• d3-annotation
• d3
• d3-module

AgML is a centralized framework for agricultural machine learning. AgML provides access to public agricultural datasets for common agricultural deep learning tasks, with standard benchmarks and pretrained models, as well the ability to generate synthetic data and annotations.

• deep-learning
• agriculture
• pytorch
• dataset

🏃 The go-to single-cell Foundation Model

• batch-correction
• cell-biology
• celltype-annotation
• denoising

Crop/Weed Field Image Dataset

• dataset
• crop
• paper
• agriculture

Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications

• cell-annotation
• multiplexed-imaging
• mpif

UV-first benchmark for protein-ligand docking with reproducible annotation, pocket similarity, and HPC workflows.

• benchmark
• bioinformatics
• cheminformatics
• computational-chemistry