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Official git repository for Biopython (originally converted from CVS)
Notebooks for financial economics. Keywords: Jupyter notebook pandas Federal Reserve FRED Ferbus GDP CPI PCE inflation unemployment wage income debt Case-Shiller housing asset portfolio equities SPX bonds TIPS rates currency FX euro EUR USD JPY yen XAU gold Brent WTI oil Holt-Winters time-series forecasting statistics econometrics
Cloud-native genomic dataframes and batch computing
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
Sharing Updatable Models (SUM) on Blockchain
Tools for computational pathology
Native R and Python sample-deletion robustness for omics: candidate certificates, minimum deletion bounds, Bioconductor model refits and donor-level pseudobulk
Read and write Neuroglancer datasets programmatically.
Autonomous multi-agent framework to optimize scientific software
MCP server for spatial transcriptomics analysis through natural language interfaces.
Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics