Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.
- histopathology-images
- microscopy
- sliding-windows
- medical-image-analysis
Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell
- histology
- wsi-images
- pan-cancer-analysis
- genomics
Automated 3D brain registration with support for multiple species and atlases.
Axon/Myelin segmentation using Deep Learning
A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources
Histology Topography Cytometry Analysis Toolbox