Repository Index

Count your code, quickly.

• tokei
• cloc
• badge
• rust

OpenGL Mathematics (GLM)

• glm
• opengl
• mathematics
• vector

Qiskit is an open-source SDK for working with quantum computers at the level of extended quantum circuits, operators, and primitives.

• quantum-computing
• qiskit
• sdk
• quantum-programming-language

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

• drug-discovery
• quantum-chemistry
• deep-learning
• biology

🔩 Like builtins, but boltons. 250+ constructs, recipes, and snippets which extend (and rely on nothing but) the Python standard library. Nothing like Michael Bolton.

• python
• utilities
• cache
• data-structures

The Rocq Prover is an interactive theorem prover, or proof assistant. It provides a formal language to write mathematical definitions, executable algorithms and theorems together with an environment for semi-interactive development of machine-checked proofs.

• proof-assistant
• coq
• theorem-proving
• dependent-types

Official git repository for Biopython (originally converted from CVS)

• python
• bioinformatics
• genomics
• biopython

Python framework for creating, editing, and running Noisy Intermediate-Scale Quantum (NISQ) circuits.

• nisq
• quantum-algorithms
• quantum-computing
• cirq

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

• nci-itcr
• nci-qin
• quantitative-imaging
• imaging-informatics

PennyLane is an open-source quantum software platform for quantum computing, quantum machine learning, and quantum chemistry. Create meaningful quantum algorithms, from inspiration to implementation.

• quantum
• machine-learning
• deep-learning
• neural-network

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

• pytorch
• protein-structure
• alphafold2

Multi-language suite for high-performance solvers of differential equations and scientific machine learning (SciML) components. Ordinary differential equations (ODEs), stochastic differential equations (SDEs), delay differential equations (DDEs), differential-algebraic equations (DAEs), and more in Julia.

• differential-equations
• differentialequations
• julia
• ode

Multi-platform, free open source software for visualization and image computing.

• medical-imaging
• vtk
• itk
• python

RNA-seq aligner

QuTiP: Quantum Toolbox in Python

• qutip
• python
• quantum-toolbox
• quantum

LAPACK development repository

• linear-algebra
• lapack
• blas
• lapacke

Linear algebra, eigenvalues, FFT, Bessel, elliptic, orthogonal polys, geometry, NURBS, numerical quadrature, 3D transfinite interpolation, random numbers, Mersenne twister, probability distributions, optimisation, differential equations.

• scientific-computing
• linear-algebra
• differential-equations
• sparse-systems

The Control Toolbox - An Open-Source C++ Library for Robotics, Optimal and Model Predictive Control

• optimal-control
• model-predictive-control
• ilqr
• ilqg

Deep probabilistic analysis of single-cell and spatial omics data

• scrna-seq
• variational-bayes
• variational-autoencoder
• cite-seq

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

• diffusion-models
• docking
• binding
• computational-biology

A Python library for quantum programming using Quil.

• forest
• quil
• quantum-computing
• quantum-programming

Computational Geometry Unity library with implementations of intersection algorithms, triangulations like delaunay, voronoi diagrams, polygon clipping, bezier curves, ear clipping, convex hulls, mesh simplification, etc

• unity3d
• computational-geometry
• voronoi
• intersections

Notebooks for financial economics. Keywords: Jupyter notebook pandas Federal Reserve FRED Ferbus GDP CPI PCE inflation unemployment wage income debt Case-Shiller housing asset portfolio equities SPX bonds TIPS rates currency FX euro EUR USD JPY yen XAU gold Brent WTI oil Holt-Winters time-series forecasting statistics econometrics

• jupyter-notebook
• pandas
• federal-reserve
• gdp

Brian is a free, open source simulator for spiking neural networks.

• python
• neuroscience
• science
• differential-equations