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Suite of tools for deploying and training deep learning models using the JVM. Highlights include model import for keras, tensorflow, and onnx/pytorch, a modular and tiny c++ library for running math code and a java based math library on top of the core c++ library. Also includes samediff: a pytorch/tensorflow like library for running deep learn...
Python framework for creating, editing, and running Noisy Intermediate-Scale Quantum (NISQ) circuits.
Lightweight, general, scalable C++ library for finite element methods
A collection of GICP-based fast point cloud registration algorithms
Biological foundation modeling from molecular to genome scale
Python+Numpy+OpenGL: fast, scalable and beautiful scientific visualization
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
A coupling library and ecosystem for partitioned multi-physics and multi-scale simulations, including surface and volume coupling.
QuadriFlow: A Scalable and Robust Method for Quadrangulation
A header-only C++ library for large scale eigenvalue problems
Interactive network visualization in Python and Dash, powered by Cytoscape.js
Exascale multiphase flow solver — 2025 Gordon Bell Prize Finalist | 200T grid points on 43K+ GPUs
Reference mapping for single-cell genomics
Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PLIP is a large-scale pre-trained model that can be used to extract visual and language features from pathology images and text description. The model is a fine-tuned version of the original CLIP model.
An extension for Inkscape that makes it easier to draw optical diagrams.
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
The TiGL Geometry Library to process aircraft geometries in pre-design.
Fundamentals 5 Code Library for FreePascal and Delphi
CEED Library: Code for Efficient Extensible Discretizations
Practical volume computation and sampling in high dimensions
Fast Math Library for Delphi
scPerturb: A resource and a python/R tool for single-cell perturbation data