g2o: A General Framework for Graph Optimization
- g2o
- slam
- c-plus-plus
- graph-optimization
Repository Index
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A fast and robust point cloud registration library
- point-clouds
- robotics
- optimization
- 3d-registration
Python package for graph neural networks in chemistry and biology
- deep-learning
- graph-neural-networks
- dgl
- cheminformatics
A Python platform to perform parallel computations of optimisation tasks (global and local) via the asynchronous generalized island model.
- optimization
- optimization-algorithms
- optimization-methods
- optimization-problem
RNA Velocity generalized through dynamical modeling
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Official repository for the ProteinGym benchmarks
- benchmark
- computational-biology
- protein
- protein-design
Benchmarking analysis of data integration tools
Reference mapping for single-cell genomics
- single-cell
- deep-learning
- rna-seq-analysis
- data-integration
Schema and generated objects for biolink data model and upper ontology
- biolink
- monarchinitiative
- gene-ontology
- datamodel
Associated Repository for "Translation between Molecules and Natural Language"
A collection of useful mathematical functions in Elixir with a slant towards statistics, linear algebra and machine learning
Repository for Nicheformer: a foundation model for single-cell and spatial omics
Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.
- disentanglement
- drug-discovery
- genomics
- perturbation
Learning cell communication from spatial graphs of cells
- tensorflow
- gnn
- glm
- cvae
2D triangulation library. Allows translating lines and polygons (both based on points) to the language of GPUs.
- triangulation
- computational-geometry
- golang
Multigrate: multiomic data integration for single-cell genomics
A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders