Repository Index

Code for running RFdiffusion

This package contains deep learning models and related scripts for RoseTTAFold

Generative biopolymer design with rich conditioning.

Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome

• cancer-genomics
• cnv-detection
• single-cell
• phylogeny

scPerturb: A resource and a python/R tool for single-cell perturbation data

• cite-seq
• database
• perturbation
• scatac-seq

Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.

Deep learning model for single-cell inference of multi-omic profiles from a single input modality.

• single-cell
• scrna-seq
• scatac-seq
• deep-neural-networks