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Leptonica is an open source library containing software that is broadly useful for image processing and image analysis applications. The official github repository for Leptonica is: danbloomberg/leptonica. See leptonica.org for more documentation.

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

  • calcium-imaging
  • deconvolution
  • source-extraction
  • motion-correction

HDR Toolbox for processing High Dynamic Range (HDR) images into MATLAB and Octave

  • hdr
  • tone-mapping
  • inverse-tonemapping
  • tonemapping

ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.

  • stitching
  • microscopy
  • microscopy-images
  • fluorescence-microscopy-imaging