MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
- python
- neuroscience
- electroencephalography
- magnetoencephalography
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Multi-platform, free open source software for visualization and image computing.
- medical-imaging
- vtk
- itk
- python
Infrastructure for evolutionary AI systems. GPU-accelerated, PyTorch-based optimization with an ecosystem of algorithm libraries, benchmarks, and tools.
- evolutionary-algorithms
- neuroevolution
- gpu-acceleration
- multi-objective-optimization
NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing
- python
- ecg
- eda
- emg
For running psychology and neuroscience experiments
- science
- neuroscience
- experiment
- experimental-design
Train AI models efficiently on medical images using any framework
- pytorch
- deep-learning
- keras
- neuroimaging
Notebooks for financial economics. Keywords: Jupyter notebook pandas Federal Reserve FRED Ferbus GDP CPI PCE inflation unemployment wage income debt Case-Shiller housing asset portfolio equities SPX bonds TIPS rates currency FX euro EUR USD JPY yen XAU gold Brent WTI oil Holt-Winters time-series forecasting statistics econometrics
- jupyter-notebook
- pandas
- federal-reserve
- gdp
Brian is a free, open source simulator for spiking neural networks.
- python
- neuroscience
- science
- differential-equations
A Python package to visualise neuroanatomical data in atlas space
- neuroscience
- python
- anatomy
- visualization
Automated 3D cell detection in very large images
- microscopy
- cell-detection
- deep-learning
- image-analysis
A Python interface to access neuroanatomical atlases
- neuroscience
- python
- microscopy
- registration
Automated 3D brain registration with support for multiple species and atlases.
- registration
- atlases
- brain
- neuroscience
Motor simulation plugins for Gazebo - ROS
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
- neuroimaging
- reproducibility
- pipeline
- meta-analysis
Inner ear models for Python
- python
- cochlea
- inner-ear
- model
Axon/Myelin segmentation using Deep Learning
- deep-learning
- machine-learning
- myelin
- axon
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
- r
- neuroanatomy-toolbox
- cran
- neuron
The framework for quantification of neuronal anatomy
- neuroscience
- neuroanatomy-toolbox
- imagej
- imagej2
Workbench for practical machine learning in Ruby.
- machine-learning
- machine-learning-algorithms
- neural-network
- neural-networks
mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance
- qa
- mri
- neuroimaging
- niqc
legacy signal processing leveraging afni, ants, fsl, nipy, robex, and wavelet toolbox - brnfswdktm
- fmri-preprocessing
- fmri
a collection of small utlities useful for neuroimaging research
- utilities