1.stardist / stardist
StarDist - Object Detection with Star-convex Shapes
+90 stars
from 1,197 · score 4.51
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6 repositories by Attention Score · May 7, 2026 – Nov 2, 2026 (UTC)
2.mahmoodlab / CONCH
Vision-Language Pathology Foundation Model - Nature Medicine
+47 stars
from 494 · score 3.87
3.sohmandal / classpose
A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources
+15 stars
from 24 · score 2.77
4.kreshuklab / panseg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
+12 stars
from 124 · score 2.56
5.mahmoodlab / TOAD
AI-based pathology predicts origins for cancers of unknown primary - Nature
+3 stars
from 183 · score 1.39
6.4DNucleome / PartSeg
Tool for segmentation in bioimaging
+2 stars
from 37 · score 1.10