1.brian-team / brian2
Brian is a free, open source simulator for spiking neural networks.
+52 stars
from 1,202 · score 3.97
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2.brainglobe / brainrender
A Python package to visualise neuroanatomical data in atlas space
+19 stars
from 663 · score 3.00
3.MouseLand / suite2p
cell detection in calcium imaging recordings
+14 stars
from 461 · score 2.71
4.brainglobe / brainglobe-atlasapi
A Python interface to access neuroanatomical atlases
+7 stars
from 183 · score 2.08
5.PytorchConnectomics / pytorch_connectomics
PyTorch Connectomics: segmentation toolbox for EM connectomics
+5 stars
from 197 · score 1.79
6.brainglobe / cellfinder
Automated 3D cell detection in very large images
+2 stars
from 230 · score 1.10
7.brainglobe / brainreg
Automated 3D brain registration with support for multiple species and atlases.
+2 stars
from 149 · score 1.10
8.mrkrd / cochlea
Inner ear models for Python
+1 stars
from 129 · score 0.69