1.datamol-io / datamolMolecular Processing Made Easy.pythonmoleculerdkitdrug-discoverydrug-designmolecules+2 morePythonAPACHE-2.0557 total66 forks+5 starsfrom 552 · score 1.79
2.mcs07 / MolVSMolecule Validation and StandardizationrdkitpythonchemistrycheminformaticsstandardizationvalidationPythonMIT189 total59 forks+2 starsfrom 187 · score 1.10
3.LigandPro / MatchaMulti-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.alphafold3dockingdrug-designdrug-discoveryflowmatchinggnina+8 morePythonOther license37 total4 forks+1 starsfrom 36 · score 0.69