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Topics: scanpy

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3 repositories by Attention Score · Oct 4, 2026 – Nov 2, 2026 (UTC)

Language: Python
Topic: scanpy
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1.ElliotXie / autozyme

Autonomous multi-agent framework to optimize scientific software

acceleration
agentic-ai
ai-agents
bioinformatics
code-optimization
genomics
+11 more

Python MIT57 total4 forks

+6 stars

from 51 · score 1.95

2.cafferychen777 / ChatSpatial

MCP server for spatial transcriptomics analysis through natural language interfaces.

bioinformatics
cell-communication
deconvolution
machine-learning
python
single-cell
+14 more

Python MIT45 total14 forks

+1 stars

from 44 · score 0.69

3.cafferychen777 / flashdeconv

Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics

bioinformatics
cell-type-deconvolution
computational-biology
deconvolution
python
scanpy
+3 more

Python BSD-3-CLAUSE26 total0 forks

+1 stars

from 25 · score 0.69

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Ranked by stars gained in the window. The score is the natural log of one plus that gain, so a repository's rank is exactly its star gain's rank.

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The filters narrow the same eligible repositories. A repository matches the topics when it has any of them. Total stars is the count now. Last push and creation on the Repository Host count back from the start of today (UTC). The counts beside the languages, licenses, and topics include all ranked repositories in the window. A Category holds the repositories that its published rules match; see Categories.

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