1.scverse / scvi-toolsDeep probabilistic analysis of single-cell and spatial omics datascrna-seqvariational-bayesvariational-autoencodercite-seqsingle-cell-genomicssingle-cell-rna-seq+4 morePythonBSD-3-CLAUSE1.7K total482 forks+113 starsfrom 1,606 · score 4.74
2.Teichlab / celltypistA tool for semi-automatic cell type classificationpythonsingle-cellmachine-learningscrna-seqcell-type-classificationlabel-transferPythonMIT517 total61 forks+45 starsfrom 472 · score 3.83