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Topics: spatial-transcriptomics

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3 repositories by Attention Score · Oct 27, 2026 – Nov 2, 2026 (UTC)

Language: Python
Topic: spatial-transcriptomics
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1.ElliotXie / autozyme

Autonomous multi-agent framework to optimize scientific software

acceleration
agentic-ai
ai-agents
bioinformatics
code-optimization
genomics
+11 more

Python MIT57 total4 forks

+3 stars

from 54 · score 1.39

2.scverse / squidpy

Spatial Single Cell Analysis in Python

single-cell-rna-seq
single-cell-genomics
spatial-transcriptomics
spatial-analysis
image-analysis
data-visualization
+2 more

Python BSD-3-CLAUSE613 total128 forks

+2 stars

from 611 · score 1.10

3.cafferychen777 / flashdeconv

Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics

bioinformatics
cell-type-deconvolution
computational-biology
deconvolution
python
scanpy
+3 more

Python BSD-3-CLAUSE26 total0 forks

+1 stars

from 25 · score 0.69

Order: Attention Score

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The filters narrow the same eligible repositories. A repository matches the topics when it has any of them. Total stars is the count now. Last push and creation on the Repository Host count back from the start of today (UTC). The counts beside the languages, licenses, and topics include all ranked repositories in the window. A Category holds the repositories that its published rules match; see Categories.

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