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Ranked by Attention Score: stars gained over the last 30 complete days
13 repositories by Attention Score · Oct 6, 2026 – Nov 4, 2026 (UTC)
3.aqlaboratory / openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
- pytorch
- protein-structure
- alphafold2
4.evo-design / evo
Biological foundation modeling from molecular to genome scale
5.chaidiscovery / chai-lab
Chai-1, SOTA model for biomolecular structure prediction
6.jerryji1993 / DNABERT
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
- kmer
- dnabert-model
- kmer-format
- gpu
- sequence
- genome
- +4 more
7.MAGICS-LAB / DNABERT_2
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
- dataset
- dna
- dna-processing
- dna-training
- genome
- genome-analysis
- +10 more
8.calico / basenji
Sequential regulatory activity predictions with deep convolutional neural networks.
9.biomap-research / scFoundation
The repository host gives no description.
11.calico / borzoi
RNA-seq prediction with deep convolutional neural networks.
12.kuleshov-group / caduceus
Bi-Directional Equivariant Long-Range DNA Sequence Modeling
13.Perturbation-Response-Prediction / PRnet
PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbations at bulk and single-cell levels.