1.xxPcy / PharmaLLM-Agent
Medical LLM agent and MRI segmentation workspace built on PharmaLLM, with LangGraph, vLLM, and BEU-Net.
+191 stars
from 4 · score 5.26
Trending repositories
Ranked by Attention Score: stars gained over the last 7 complete days
75 repositories by Attention Score · Oct 28, 2026 – Nov 3, 2026 (UTC)
2.WenyuChiou / ai-research-skills
Universal SKILL.md catalog for research workflows: literature review, research design, project memory, manuscript writing, and cross-agent delegation for Claude Code, Codex, Gemini, Cursor, OpenClaw, and generic AI clients.
- academic-writing
- ai-skills
- notebooklm
- obsidian
- zotero
- claude-code
- +14 more
+171 stars
from 408 · score 5.15
+88 stars
from 28,955 · score 4.49
4.ntfargo / Relapse-Exploit
Exploit chain for PS5 7.00 - 13.60
+59 stars
from 2,588 · score 4.09
+42 stars
from 449 · score 3.76
6.PavelDoGreat / WebGL-Fluid-Simulation
Play with fluids in your browser (works even on mobile)
- fluid
- webgl
- simulation
- gpu
- navier-stokes
+28 stars
from 16,770 · score 3.37
7.deepchem / deepchem
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
- drug-discovery
- quantum-chemistry
- deep-learning
- biology
- materials-science
- hacktoberfest
+28 stars
from 7,095 · score 3.37
8.heise3 / ExtremaRank
Native R and Python sample-deletion robustness for omics: candidate certificates, minimum deletion bounds, Bioconductor model refits and donor-level pseudobulk
- bioinformatics
- exact-optimization
- metabolomics
- paired-data
- proteomics
- python
- +14 more
+25 stars
from 262 · score 3.26
9.gcorso / DiffDock
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
- diffusion-models
- docking
- binding
- computational-biology
- equivariance
- machine-learning
- +2 more
+10 stars
from 1,589 · score 2.40
+9 stars
from 12,381 · score 2.30
11.mtahiraslan / data-analyst-roadmap
Based on my own experience, I believe this roadmap provides clear answers to all the key questions about becoming a data analyst from scratch, including which technologies and programming languages to learn, what soft skills are essential, and how to start a professional career in this field.
- blogs
- businessintelligence
- courses
- data
- dataanalysis
- dataanalyst
- +14 more
+9 stars
from 1,113 · score 2.30
12.tonyzedginidze / librecalculator
The universe in numbers. Free, open-source calculators for everything countable.
+9 stars
from 325 · score 2.30
13.boyter / scc
Sloc, Cloc and Code: scc is a very fast accurate code counter with complexity calculations and COCOMO estimates written in pure Go
+8 stars
from 8,849 · score 2.20
14.alandefreitas / matplotplusplus
Matplot++: A C++ Graphics Library for Data Visualization 📊🗾
- plot-categories
- data-visualization
- contour-plots
- polar-plots
- matplot
- data-analysis
- +10 more
+7 stars
from 4,938 · score 2.08
15.microsoft / QuantumKatasArchived
Tutorials and programming exercises for learning Q# and quantum computing
- quantum-computing
- qsharp
- coding-kata
- hacktoberfest
- quantum-programming
- tutorials
- +1 more
+6 stars
from 4,916 · score 1.95
16.appsinacup / godot-rapier-physics
Godot Rapier Physics – 2D and 3D physics engine for the Godot game engine. with better stability, performance, liquids, determinism, state serialization and no ghost collisions.
- godot
- godot-engine
- godot4
- godotengine
- rapier
- 2d
- +3 more
+6 stars
from 1,032 · score 1.95
17.Turfjs / turf
A modular geospatial engine written in JavaScript and TypeScript
- javascript
- algorithm
- computational-geometry
- geojson
- turf
- gis
- +3 more
+5 stars
from 10,526 · score 1.79
18.dpilger26 / NumCpp
C++ implementation of the Python Numpy library
- python
- numpy
- c-plus-plus
- numerical-analysis
- scientific-computing
- algorithms
- +3 more
+5 stars
from 3,964 · score 1.79
19.bshoshany / thread-pool
BS::thread_pool: a fast, lightweight, modern, and easy-to-use C++17 / C++20 / C++23 thread pool library
- thread-pool
- threadpool
- multithreading
- cpp
- cpp17
- cplusplus
- +13 more
+5 stars
from 3,079 · score 1.79
20.nschloe / meshio
:spider_web: input/output for many mesh formats
- vtk
- pypi
- python
- mesh
- mathematics
- engineering
- +1 more
+5 stars
from 2,336 · score 1.79
21.datoviz / datoviz
⚡ Datoviz: high-performance GPU rendering for scientific data visualization
- visualization
- graphics
- data-visualization
- scientific-visualization
- gpu
- vulkan
- +6 more
+5 stars
from 819 · score 1.79
22.bayesian-optimization / BayesianOptimization
A Python implementation of global optimization with gaussian processes.
- optimization
- gaussian-processes
- bayesian-optimization
- python
- simple
+4 stars
from 8,725 · score 1.61
23.chainer / chainer-chemistry
Chainer Chemistry: A Library for Deep Learning in Biology and Chemistry
- deep-learning
- chemistry
- neural-network
- biology
- chainer
- python
- +1 more
+4 stars
from 711 · score 1.61
24.zoharbabin / web-researcher-mcp
Search the web and primary sources, read full pages, and check every citation. MCP server for Claude, Cursor, Codex and more. Runs on your machine.
+4 stars
from 72 · score 1.61
25.aidenybai / million
Optimizing compiler for React
- hacktoberfest
- million
- millionjs
- virtual-dom
- react
- blockdom
- +11 more
+3 stars
from 17,660 · score 1.39
26.mikedh / trimesh
Python library for loading and using triangular meshes.
- mesh
- triangular-meshes
- geometry
- python
+3 stars
from 3,712 · score 1.39
27.pgmpy / pgmpy
Python Toolkit for Causal and Probabilistic Reasoning
- python
- bayesian-networks
- causal-inference
- causal-discovery
- causal-identification
- causal-models
- +9 more
+3 stars
from 3,363 · score 1.39
28.ybayle / awesome-deep-learning-music
List of articles related to deep learning applied to music
- awesome
- awesome-list
- unicorns
- list
- lists
- resources
- +14 more
+3 stars
from 2,996 · score 1.39
29.microsoft / MarS
MarS: a Financial Market Simulation Engine Powered by Generative Foundation Model
+3 stars
from 1,885 · score 1.39
30.owlbarn / owl
Owl - OCaml Scientific Computing @ https://ocaml.xyz
- matrix
- linear-algebra
- ndarray
- statistical-functions
- topic-modeling
- regression
- +14 more
+3 stars
from 1,355 · score 1.39
31.ddemidov / amgcl
C++ library for solving large sparse linear systems with algebraic multigrid method
- amg
- c-plus-plus
- sparse-linear-systems
- opencl
- cuda
- gpgpu
- +6 more
+3 stars
from 882 · score 1.39
32.Mariewelt / OpenChem
OpenChem: Deep Learning toolkit for Computational Chemistry and Drug Design Research
- computational-chemistry
- computational-biology
- deep-learning
- deep-neural-networks
- graph-convolutional-networks
- drug-discovery
- +5 more
+3 stars
from 756 · score 1.39
33.OATML-Markslab / ProteinGym
Official repository for the ProteinGym benchmarks
- benchmark
- computational-biology
- protein
- protein-design
- protein-fitness
+3 stars
from 481 · score 1.39
34.MFlowCode / MFC
Exascale multiphase flow solver — 2025 Gordon Bell Prize Finalist | 200T grid points on 43K+ GPUs
+3 stars
from 436 · score 1.39
35.paulmillr / noble-post-quantum
Auditable & minimal JS implementation of public-key post-quantum cryptography
- dilithium
- kyber
- ml-kem
- post-quantum-cryptography
- sphincs
- sphincs-plus
- +14 more
+3 stars
from 367 · score 1.39
36.HIPS / autograd
Efficiently computes derivatives of NumPy code.
- autograd
- automatic-differentiation
- numpy
- python
- deep-learning
- derivative
- +8 more
+2 stars
from 7,549 · score 1.10
37.markrogoyski / math-php
Powerful modern math library for PHP: Features descriptive statistics and regressions; Continuous and discrete probability distributions; Linear algebra with matrices and vectors, Numerical analysis; special mathematical functions; Algebra
- math
- mathematics
- linear-algebra
- statistics
- matrix
- probability
- +11 more
+2 stars
from 2,413 · score 1.10
38.TileDB-Inc / TileDB
The Universal Storage Engine
- tiledb
- arrays
- storage-engine
- scientific-computing
- data-analysis
- hdfs
- +7 more
+2 stars
from 2,088 · score 1.10
39.vincentlaucsb / csv-parser
A modern C++ CSV parser and serializer that doesn't make you choose between ease of use or performance.
- csv
- parser
- json
- tab-separated
- csv-parser
- statistics
- +5 more
+2 stars
from 1,135 · score 1.10
40.romeric / Fastor
A lightweight high performance tensor algebra framework for modern C++
+2 stars
from 843 · score 1.10
41.mims-harvard / PrimeKG
Precision Medicine Knowledge Graph (PrimeKG)
- knowledge-graph
- precision-medicine
- therapeutics
- bioinformatics
- dataset
- graph-machine-learning
- +2 more
+2 stars
from 836 · score 1.10
42.vcflib / vcflib
C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
- variant-calling
- genomics
- vcf-manipulation
- genotyping
- haplotypecaller
+2 stars
from 687 · score 1.10
+2 stars
from 535 · score 1.10
44.ikpil / Box2D.NET
Box2D.NET - a C# port of Box2D, is a 2D physics engine for games, .NET, Unity3D, servers
- 2d
- 2d-game
- box2d
- csharp
- game
- game-development
- +8 more
+2 stars
from 224 · score 1.10
45.kreshuklab / panseg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
- segmentation
- deep-learning
- bioinformatics
- neural-network
- bioimage-analysis
- image-segmentation
- +1 more
+2 stars
from 135 · score 1.10
46.ElliotXie / autozyme
Autonomous multi-agent framework to optimize scientific software
- acceleration
- agentic-ai
- ai-agents
- bioinformatics
- code-optimization
- genomics
- +11 more
+2 stars
from 55 · score 1.10
47.MikeMcl / bignumber.js
A JavaScript library for arbitrary-precision decimal and non-decimal arithmetic
- bignumber
- javascript
- arbitrary-precision
- decimal-places
- bigdecimal
+1 stars
from 7,012 · score 0.69
48.microsoft / QuantumArchived
Microsoft Quantum Development Kit Samples
- quantum-development-kit
- quantum
- qdk
- quantum-computing
- qsharp
- python
+1 stars
from 4,057 · score 0.69
+1 stars
from 3,773 · score 0.69
+1 stars
from 2,409 · score 0.69
51.hail-is / hail
Cloud-native genomic dataframes and batch computing
- genetics
- vcf
- genomics
- gwas
- bioinformatics
- python
- +2 more
+1 stars
from 1,081 · score 0.69
52.molecularsets / moses
Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models
- machine-learning
- generative-models
- drug-discovery
- benchmark
+1 stars
from 996 · score 0.69
53.StanfordVL / GibsonEnv
Gibson Environments: Real-World Perception for Embodied Agents
- computer-vision
- robotics
- simulator
- sim2real
- deep-learning
- deep-reinforcement-learning
- +4 more
+1 stars
from 947 · score 0.69
54.ASC-Community / AngouriMath
Open-source cross-platform symbolic algebra library for C# and F#. Can be used for both production and research purposes.
+1 stars
from 831 · score 0.69
55.softwareQinc / qpp
Modern C++ quantum computing library
- quantum-computing
- c-plus-plus
- cpp
- cpp11
- quantum
- simulator
- +2 more
+1 stars
from 677 · score 0.69
56.TUDelft-CNS-ATM / bluesky
The open source air traffic simulator
- python
- traffic
- aircraft
- simulation
- air-traffic-control
- air-transport
- +11 more
+1 stars
from 574 · score 0.69
57.microsoft / QuantumLibrariesArchived
Q# libraries for the Quantum Development Kit
- qsharp
- qdk
- quantum
- quantum-development-kit
- quantum-computing
- hacktoberfest
+1 stars
from 573 · score 0.69
58.aeturrell / skimpy
skimpy is a light weight tool that provides summary statistics about variables in data frames within the console.
- eda
- pandas
- data-science
- exploratory-data-analysis
- summary-statistics
- statistics
+1 stars
from 517 · score 0.69
59.pathsim / pathsim
A Python native dynamical system simulation framework in the block diagram paradigm.
- blockdiagram
- control-systems
- hierarchical-modeling
- nonlinear-dynamics
- simulation
- system-simulation
- +14 more
+1 stars
from 511 · score 0.69
60.gao-lab / GLUE
Graph-linked unified embedding for single-cell multi-omics data integration
- bioinformatics
- deep-learning
- single-cell
- single-cell-multiomics
+1 stars
from 483 · score 0.69
61.shenwei356 / taxonkit
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
- bioinformatics
- taxonomy
- cross-platform
- lineage
- lca
- taxid
- +2 more
+1 stars
from 483 · score 0.69
62.maximtrp / scikit-posthocs
Multiple Pairwise Comparisons (Post Hoc) Tests in Python
- posthoc-comparisons
- posthoc-tests
- python
- scikit
- statistical-analysis
- statistics
- +1 more
+1 stars
from 390 · score 0.69
63.songlab-cal / gpn
Genomic Pretrained Network - GPN, GPN-MSA, PhyloGPN, GPN-Star
- dna
- language-model
- variant-effect-prediction
- genomics
+1 stars
from 386 · score 0.69
64.erayzesen / QuarkPhysics
A 2D Soft Body and Rigid Body Physics Engine.
- 2d-physics-engine
- game-development
- physics-engine
- rigid-bodies
- soft-bodies
- physics-simulation
+1 stars
from 299 · score 0.69
65.mojaie / MolecularGraph.jl
Graph-based molecule modeling toolkit for cheminformatics
- cheminformatics
- molecular-modeling
- chemistry
- toolkit
- julia
- julia-language
- +3 more
+1 stars
from 230 · score 0.69
66.MLT-OSS / FirstData
The World's Most Comprehensive, Authoritative, and Structured Open Source Data Source Knowledge Base
- mcp
- data-sources
- ai
- awesome-list
- datasets
- fact-checking
- +14 more
+1 stars
from 185 · score 0.69
67.vlang / vtl
The V Tensor Library
- v
- hacktoberfest
- autograd
- deep-learning
- linear-algebra
- machine-learning
- +5 more
+1 stars
from 171 · score 0.69
68.sustainable-processes / summit
Optimising chemical reactions using machine learning
- chemistry
- machine-learning
- optimization
- bayesian-optimization
- neural-networks
- drug-discovery
- +4 more
+1 stars
from 154 · score 0.69
69.HazelnutParadise / insyra
Go's answer to pandas + scikit-learn: a batteries-included data analysis library with dataframes, statistics, machine learning, quant, and GPU acceleration. Run Python with seamless two-way variable sharing, or explore data straight from the Insyra CLI.
- parallel
- data-science
- data-visualization
- pandas
- linear-programming
- gonum
- +14 more
+1 stars
from 57 · score 0.69
70.microsoft / MLADS2018-QuantumMLArchived
Introduction to Quantum Machine Learning tutorial: Building a quantum perceptron using Microsoft Quantum Development Kit
+1 stars
from 56 · score 0.69
71.chrieke / geojson-invalid-geometry
🗺️ List of GeoJSON invalid geometry issues with example files
+1 stars
from 51 · score 0.69
72.emptymalei / statisticalphysics
open source E-book on statistical physics
- statistical-physics
- statistical-mechanics
+1 stars
from 51 · score 0.69
73.marcpinet / citracer
💬 Trace citation chains for any concept across research papers and render them as an interactive graph.
- academic-research
- bibliography
- citation-graph
- cli
- grobid
- literature-review
- +5 more
+1 stars
from 38 · score 0.69
74.hissain / jscipy
Java Scientific Computing Library - Signal Processing, FFT, Filters, PSD, DCT, SciPy-like APIs for JVM & Android used in Machine Learning and Data Science.
- android
- java
- python
- scipy
- scipy-signal
- signal-processing
- +13 more
+1 stars
from 25 · score 0.69
75.microsoft / MLADS2020-QuantumClassificationArchived
Quantum Classification tutorial using Microsoft Quantum Development Kit
+1 stars
from 23 · score 0.69