+1,544 stars
from 31,729 · score 7.34
Trending repositories
Ranked by Attention Score: stars gained over the last 180 complete days
91 repositories by Attention Score · May 9, 2026 – Nov 4, 2026 (UTC)
2.NVIDIA / cutlass
CUDA Templates and Python DSLs for High-Performance Linear Algebra
- cuda
- deep-learning
- deep-learning-library
- cpp
- nvidia
- gpu
- +1 more
+1,088 stars
from 9,606 · score 6.99
3.XAMPPRocky / tokei
Count your code, quickly.
+756 stars
from 14,285 · score 6.63
+732 stars
from 12,150 · score 6.60
5.Biohub / esm
The repository host gives no description.
+711 stars
from 2,304 · score 6.57
6.isl-org / Open3D
Open3D: A Modern Library for 3D Data Processing
- mesh-processing
- computer-graphics
- opengl
- cpp
- python
- reconstruction
- +14 more
+666 stars
from 13,507 · score 6.50
7.sympy / sympy
A computer algebra system written in pure Python
- python
- math
- computer-algebra
- science
- hacktoberfest
+537 stars
from 14,532 · score 6.29
+422 stars
from 10,869 · score 6.05
9.ClawBio / ClawBio
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.
- ai-agents
- bioinformatics
- equity
- genomics
- local-first
- openclaw
- +2 more
+407 stars
from 766 · score 6.01
10.openrocket / openrocket
Model-rocketry aerodynamics and trajectory simulation software
- aerospace
- flight-simulator
- java
- modeling
- optimization
- rocket
- +3 more
+402 stars
from 2,795 · score 6.00
+279 stars
from 2,842 · score 5.63
12.biopython / biopython
Official git repository for Biopython (originally converted from CVS)
- python
- bioinformatics
- genomics
- biopython
- protein
- protein-structure
- +3 more
+273 stars
from 4,988 · score 5.61
13.Slicer / Slicer
Multi-platform, free open source software for visualization and image computing.
- medical-imaging
- vtk
- itk
- python
- qt
- image-processing
- +14 more
+269 stars
from 2,435 · score 5.60
14.CGAL / cgal
The public CGAL repository, see the README below
- cgal
- c-plus-plus
- geometry
- algorithms
- library
- cpp
- +11 more
+251 stars
from 5,856 · score 5.53
15.shopspring / decimal
Arbitrary-precision fixed-point decimal numbers in Go
- go
- decimals
- precision
- money
- bignumber
- golang
+202 stars
from 7,310 · score 5.31
16.chemprop / chemprop
Message Passing Neural Networks for Molecule Property Prediction
- machine-learning
- chemistry
- neural-networks
- drug-discovery
+175 stars
from 2,341 · score 5.17
17.facebookresearch / pytorch3d
PyTorch3D is FAIR's library of reusable components for deep learning with 3D data
+170 stars
from 9,823 · score 5.14
18.BrunoLevy / geogram
a programming library with geometric algorithms
- graphics-libraries
- graphics-programming
- mesh-generation
- mesh-processing
- geometry-processing
+170 stars
from 2,403 · score 5.14
19.KratosMultiphysics / Kratos
Kratos Multiphysics (A.K.A Kratos) is a framework for building parallel multi-disciplinary simulation software. Modularity, extensibility and HPC are the main objectives. Kratos has BSD license and is written in C++ with extensive Python interface.
- kratos
- fem
- dem
- parallel-computing
- openmp
- numerical-methods
- +7 more
+139 stars
from 1,255 · score 4.94
20.mborgerding / kissfft
a Fast Fourier Transform (FFT) library that tries to Keep it Simple, Stupid
+107 stars
from 1,899 · score 4.68
+100 stars
from 719 · score 4.62
22.osrf / gazebo_models
Gazebo database of SDF models. This is a predecessor to https://app.gazebosim.org
- gazebo
- simulation
- robot-simulation
- robotics
- gazebosim
- ros
- +4 more
+99 stars
from 1,237 · score 4.61
23.SciML / DifferentialEquations.jl
Multi-language suite for high-performance solvers of differential equations and scientific machine learning (SciML) components. Ordinary differential equations (ODEs), stochastic differential equations (SDEs), delay differential equations (DDEs), differential-algebraic equations (DAEs), and more in Julia.
- differential-equations
- differentialequations
- julia
- ode
- sde
- dae
- +14 more
+95 stars
from 3,082 · score 4.56
24.dealii / dealii
The development repository for the deal.II finite element library
- finite-elements
- c-plus-plus
- fem
- hpc
- parallel-computing
- scientific-computing
- +1 more
+95 stars
from 1,660 · score 4.56
25.brian-team / brian2
Brian is a free, open source simulator for spiking neural networks.
- python
- neuroscience
- science
- differential-equations
- spiking-neural-networks
- biological-simulations
- +5 more
+93 stars
from 1,164 · score 4.54
26.stevengj / nlopt
library for nonlinear optimization, wrapping many algorithms for global and local, constrained or unconstrained, optimization
+87 stars
from 2,201 · score 4.48
27.mahmoud / boltons
🔩 Like builtins, but boltons. 250+ constructs, recipes, and snippets which extend (and rely on nothing but) the Python standard library. Nothing like Michael Bolton.
- python
- utilities
- cache
- data-structures
- statistics
- data-science
- +5 more
+86 stars
from 6,858 · score 4.47
+85 stars
from 1,686 · score 4.45
29.Reference-LAPACK / lapack
LAPACK development repository
- linear-algebra
- lapack
- blas
- lapacke
- linear-equations
- eigenvalues
- +4 more
+80 stars
from 1,838 · score 4.39
30.flame / blis
BLAS-like Library Instantiation Software Framework
- blis
- blas
- blas-libraries
- linear-algebra
- linear-algebra-library
- matrix-multiplication
- +8 more
+78 stars
from 2,620 · score 4.37
31.instadeepai / nucleotide-transformer
Foundation Models for Genomics & Transcriptomics
- genomics
- deep-learning
- transformer
- dna
- foundation-models
- transcriptomics
- +1 more
+78 stars
from 859 · score 4.37
32.mahmoodlab / UNI
Pathology Foundation Model - Nature Medicine
- foundation
- foundation-model
- histopathology
- mahmoodlab
- pathology
- uni
- +11 more
+78 stars
from 719 · score 4.37
33.mlmed / torchxrayvision
TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.
- medical-imaging
- medical-ai
- deep-learning
- machine-learning
- transfer-learning
- dataset
- +13 more
+77 stars
from 1,138 · score 4.36
34.symengine / symengine
SymEngine is a fast symbolic manipulation library, written in C++
- math
- computer-algebra
- c-plus-plus
+72 stars
from 1,354 · score 4.29
35.3dmol / 3Dmol.js
WebGL accelerated JavaScript molecular graphics library
- molecular-graphics
- molecular-modeling
- computational-biology
- computational-chemistry
+72 stars
from 964 · score 4.29
36.hjwdzh / QuadriFlow
QuadriFlow: A Scalable and Robust Method for Quadrangulation
- quadriflow
- quad
- remeshing
- quadrangulation
- geometry
+65 stars
from 817 · score 4.19
37.trilinos / Trilinos
Primary repository for the Trilinos Project
- snl-science-libs
- sandia-national-laboratories
- hpsf
- scientific-computing
- high-performance-computing
- c-plus-plus
- +2 more
+63 stars
from 1,379 · score 4.16
38.NetTopologySuite / NetTopologySuite
A .NET GIS solution that is fast and reliable for the .NET platform.
- topology
- nts
- sfs
- c-sharp
- library
- jts
- +1 more
+55 stars
from 1,673 · score 4.03
+55 stars
from 1,309 · score 4.03
40.PixarAnimationStudios / OpenSubdiv
An Open-Source subdivision surface library.
+53 stars
from 3,037 · score 3.99
41.nasa / trick
Trick Simulation Environment. Trick provides a common set of simulation capabilities and utilities to build simulations automatically.
+47 stars
from 133 · score 3.87
42.mahmoodlab / CONCH
Vision-Language Pathology Foundation Model - Nature Medicine
- bioimage-analysis
- bioimage-informatics
- conch
- foundation-model
- health-informatics
- histopathology
- +9 more
+46 stars
from 494 · score 3.85
43.hypre-space / hypre
Parallel solvers for sparse linear systems featuring multigrid methods.
- math-physics
- library
- hpc
- radiuss
+45 stars
from 830 · score 3.83
44.samtools / htslib
C library for high-throughput sequencing data formats
- htslib
- bioinformatics
- sam
- bam
- cram
- vcf
- +2 more
+39 stars
from 917 · score 3.69
45.firedrakeproject / firedrake
Firedrake is an automated system for the portable solution of partial differential equations using the finite element method (FEM)
+35 stars
from 646 · score 3.58
46.usnistgov / fipy
FiPy is a Finite Volume PDE solver written in Python
- scientific-computing
- scientific-computing-with-python
- phase-field
- materials-science
- partial-differential-equations
- shared-memory-parallel
- +2 more
+33 stars
from 613 · score 3.53
+32 stars
from 568 · score 3.50
48.libtom / libtommath
LibTomMath is a free open source portable number theoretic multiple-precision integer library written entirely in C.
- mpi
- libtommath
- c
- math
- multi-precision
+31 stars
from 782 · score 3.47
49.biolink / biolink-model
Schema and generated objects for biolink data model and upper ontology
- biolink
- monarchinitiative
- gene-ontology
- datamodel
- standard
- specification
- +11 more
+31 stars
from 237 · score 3.47
50.fo-dicom / fo-dicom
Fellow Oak DICOM for .NET, .NET Core, Universal Windows, Android, iOS, Mono and Unity
- dicom
- netcore
- medical
- medical-imaging
- dot-net
- c-sharp
- +4 more
+30 stars
from 1,190 · score 3.43
51.immunogenomics / harmony
Fast, sensitive and accurate integration of single-cell data with Harmony
+30 stars
from 644 · score 3.43
52.MmgTools / mmg
open source software for bidimensional and tridimensional remeshing
- mesh
- mesh-adaptation
- anisotropic-mesh-adaptation
- isotropic-mesh-adaptation
- mesh-quality-improvement
- surface-improvement
- +11 more
+29 stars
from 462 · score 3.40
53.PetteriAimonen / libfixmath
Cross Platform Fixed Point Maths Library
+28 stars
from 861 · score 3.37
54.alphaville / optimization-engine
Nonconvex embedded optimization: code generation for fast real-time optimization + ROS support
- embedded-optimization
- nonconvex
- model-predictive-control
- rust-library
- rust
- rust-crate
- +14 more
+22 stars
from 629 · score 3.14
55.UniMath / UniMath
This rocq library aims to formalize a substantial body of mathematics using the univalent point of view.
- coq
- mathematics
- unimath
- coq-library
- foundations
- rocq
- +1 more
+21 stars
from 1,001 · score 3.09
56.rbdl / rbdl
RBDL is a C++ library that contains some essential and efficient rigid body dynamics algorithms such as the Articulated Body Algorithm (ABA) for forward dynamics, Recursive Newton-Euler Algorithm (RNEA) for inverse dynamics, the Composite Rigid Body Algorithm (CRBA) for the efficient computation of the joint space inertia matrix and is also able to compute forward dynamics with external contact constraints and collision impulses. Furthermore it has some basic support for forward and inverse kinematics.
- articulated-body-algorithm
- inverse-dynamics
- forward-dynamics
- multi-body-dynamics
- inverse-kinematics
- robotics
+21 stars
from 688 · score 3.09
57.rafat / wavelib
C Implementation of 1D and 2D Wavelet Transforms (DWT,SWT and MODWT) along with 1D Wavelet packet Transform and 1D Continuous Wavelet Transform.
- wavelets
- dwt
- continuous-wavelet-transform
- wavelet-packet-trees
- c
- cpp
+20 stars
from 429 · score 3.04
58.sanderlab / scPerturb
scPerturb: A resource and a python/R tool for single-cell perturbation data
+20 stars
from 172 · score 3.04
59.qhull / qhull
Qhull development for www.qhull.org -- Qhull 2020.2 (8.1-alpha1) at https://github.com/qhull/qhull/wiki
- qhull
- computational-geometry
- convex-hull
- delaunay-triangulation
- voronoi-diagram
- halfspace-intersection
- +3 more
+18 stars
from 810 · score 2.94
60.rsvp / fecon235
Notebooks for financial economics. Keywords: Jupyter notebook pandas Federal Reserve FRED Ferbus GDP CPI PCE inflation unemployment wage income debt Case-Shiller housing asset portfolio equities SPX bonds TIPS rates currency FX euro EUR USD JPY yen XAU gold Brent WTI oil Holt-Winters time-series forecasting statistics econometrics
- jupyter-notebook
- pandas
- federal-reserve
- gdp
- inflation
- housing
- +14 more
+17 stars
from 1,265 · score 2.89
61.brandon-rhodes / pyephem
Scientific-grade astronomy routines for Python
+17 stars
from 883 · score 2.89
+17 stars
from 544 · score 2.89
63.chebfun / chebfun
Chebfun: numerical computing with functions.
+16 stars
from 665 · score 2.83
64.ebassi / graphene
A thin layer of graphic data types
- graphics-library
- vector
- transformations
- matrix
- 3d-transformations
- c
- +4 more
+16 stars
from 425 · score 2.83
65.rocq-community / fourcolor
Formal proof of the Four Color Theorem [maintainer=@ybertot]
- coq
- ssreflect
- mathcomp
- four-color-theorem
- coq-ci
+16 stars
from 237 · score 2.83
66.inducer / meshpy
2D/3D simplicial mesh generator interface for Python (Triangle, TetGen, gmsh)
- python
- mesh-generation
- scientific-computing
- triangle
- tetgen
- wrapper
- +1 more
+15 stars
from 575 · score 2.77
67.excessive / cpml
Cirno's Perfect Math Library: Just about everything you need for 2D/3D games. Hopefully.
+13 stars
from 341 · score 2.64
68.LigandPro / Matcha
Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.
- alphafold3
- docking
- drug-design
- drug-discovery
- flowmatching
- gnina
- +8 more
+13 stars
from 24 · score 2.64
69.PaddlePaddle / Quantum
The repository host gives no description.
+12 stars
from 639 · score 2.56
70.spamegg1 / Math-for-CS-solutions
Solutions to In-Class questions, Problem Sets and Exams of MIT Mathematics for Computer Science 2015 (same as 2019 Open Learning Library)
- calculus
- counting
- functions
- graph
- graph-theory
- induction
- +11 more
+12 stars
from 187 · score 2.56
+11 stars
from 14,077 · score 2.48
72.yt-project / yt
Main yt repository
- data
- visualization
- analysis
- python
- scientific-computing
- scientific-visualization
- +6 more
+11 stars
from 548 · score 2.48
73.haddocking / pdb-tools
A dependency-free cross-platform swiss army knife for PDB files.
- python
- protein
- pdb
- bioinformatics
- structural-biology
- structural-bioinformatics
- +2 more
+10 stars
from 451 · score 2.40
74.lukaszcz / coqhammer
CoqHammer: An Automated Reasoning Hammer Tool for Rocq - Proof Automation for Dependent Type Theory
- coq
- hammer
- automation
- proof-search
- theorem-prover
- verification
- +3 more
+10 stars
from 239 · score 2.40
+8 stars
from 1,566 · score 2.20
76.pschwllr / MolecularTransformer
The repository host gives no description.
+8 stars
from 421 · score 2.20
77.xiaoyeli / superlu
Supernodal sparse direct solver. https://portal.nersc.gov/project/sparse/superlu/
+8 stars
from 329 · score 2.20
78.dib-lab / khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
- dna
- k-mer
- python
- bloom-filter
- count-min-sketch
- graph-traversal
- +1 more
+7 stars
from 784 · score 2.08
79.pymor / pymor
pyMOR - Model Order Reduction with Python
- python
- model-reduction
- model-order-reduction
- control-systems
- state-space
- data-driven
- +8 more
+6 stars
from 341 · score 1.95
80.JuliaPhylo / PhyloNetworks.jl
PhyloNetworks: a julia package with utilities for phylogenetic networks
+6 stars
from 171 · score 1.95
81.bp-kelley / descriptastorus
Descriptor computation(chemistry) and (optional) storage for machine learning
+5 stars
from 277 · score 1.79
82.mapbox / wagyu
A general library for geometry operations of union, intersections, difference, and xor
- computational-geometry
- union
- intersection
- xor
- geometry
- difference
- +1 more
+5 stars
from 193 · score 1.79
83.aelefebv / nellie
Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
- biology
- fluorescence
- image-analysis
- image-processing
- machine-learning
- microscopy
- +3 more
+5 stars
from 93 · score 1.79
+4 stars
from 246 · score 1.61
85.xtreemze / defend
Procedural Cross-Platform 3D Tower Defense WebGame with Physics and AI and Procedural Sound
- babylonjs
- javascript
- typescript
- projectiles
- towers
+3 stars
from 23 · score 1.39
86.rii-mango / Papaya
A pure JavaScript medical research image viewer.
+2 stars
from 580 · score 1.10
87.OpenSimulationInterface / open-simulation-interface
A generic interface for the environmental perception of automated driving functions in virtual scenarios.
- asam
- osi
- open-simulation-interface
- simulation
+2 stars
from 298 · score 1.10
88.ekrich / sblas
Scala Native BLAS (Basic Linear Algebra Subprograms) supporting Linux and macOS
- scala
- scala-native
- math
- linear-algebra
- blas
- linux
- +1 more
+2 stars
from 37 · score 1.10
89.fkromer / awesome-gazeboArchived
Gazebo, the simulation framework for ROS1 and ROS2 is awesome!
+1 stars
from 154 · score 0.69
90.szhorvat / IGraphM
IGraph/M is the igraph interface for Mathematica
- igraph
- mathematica
- mathematics
- network-graph
- graph-theory
- raspberry-pi
- +3 more
+1 stars
from 100 · score 0.69
+1 stars
from 11 · score 0.69