401.uwdb / Cosette
Cosette is an automated SQL solver.
+7 stars
from 683 · score 2.08
Trending repositories
Ranked by Attention Score: stars gained over the last 180 complete days
401–500 of 526 by Attention Score · May 9, 2026 – Nov 4, 2026 (UTC)
402.meshpro / optimesh
:spider_web: Mesh optimization, mesh smoothing.
- python
- pypi
- mathematics
- physics
- engineering
- fem
- +3 more
+7 stars
from 627 · score 2.08
+7 stars
from 602 · score 2.08
404.MolecularAI / ReinventArchived
The repository host gives no description.
- cheminformatics
- neural-networks
- astrazeneca
- reinforcement-learning
- denovo-design
- transfer-learning
+7 stars
from 371 · score 2.08
405.isayev / ReLeaSE
Deep Reinforcement Learning for de-novo Drug Design
- deeplearning
- reinforcement-learning
- cheminformatics
- molecular-modeling
- drug-discovery
- qsar
+7 stars
from 368 · score 2.08
+7 stars
from 337 · score 2.08
407.samoturk / mol2vecArchived
Mol2vec - an unsupervised machine learning approach to learn vector representations of molecular substructures
- python
- machine-learning
- cheminformatics
+7 stars
from 287 · score 2.08
408.brainglobe / cellfinder
Automated 3D cell detection in very large images
- microscopy
- cell-detection
- deep-learning
- image-analysis
- neuroscience
- python
- +2 more
+7 stars
from 226 · score 2.08
409.gecko0307 / dlib
Allocators, I/O streams, math, geometry, image and audio processing for D
- utility-library
- dlang
- linear-algebra
- computational-geometry
- image-processing
- audio-processing
- +8 more
+7 stars
from 224 · score 2.08
410.PatWalters / rd_filters
A script to run structural alerts using the RDKit and ChEMBL
+7 stars
from 166 · score 2.08
411.cornerstonejs / cornerstone
[Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/
- javascript
- cornerstone
- dicom
- medical-imaging
- nci-itcr
+6 stars
from 2,100 · score 1.95
412.davidmoten / rtree
Immutable in-memory R-tree and R*-tree implementations in Java with reactive api
+6 stars
from 1,138 · score 1.95
413.ceeK / Solar
A Swift micro library for generating Sunrise and Sunset times on device, requiring no network access.
+6 stars
from 609 · score 1.95
414.microsoft / QuantumLibrariesArchived
Q# libraries for the Quantum Development Kit
- qsharp
- qdk
- quantum
- quantum-development-kit
- quantum-computing
- hacktoberfest
+6 stars
from 568 · score 1.95
415.zsdonghao / u-net-brain-tumor
U-Net Brain Tumor Segmentation
- tensorflow
- tensorlayer
- unet
- medical-imaging
+6 stars
from 531 · score 1.95
416.pymor / pymor
pyMOR - Model Order Reduction with Python
- python
- model-reduction
- model-order-reduction
- control-systems
- state-space
- data-driven
- +8 more
+6 stars
from 341 · score 1.95
417.nathan-osman / go-sunrise
Go package for calculating the sunrise and sunset times for a given location
+6 stars
from 172 · score 1.95
418.JuliaPhylo / PhyloNetworks.jl
PhyloNetworks: a julia package with utilities for phylogenetic networks
+6 stars
from 171 · score 1.95
419.OpenBioLink / OpenBioLink
OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
+6 stars
from 158 · score 1.95
420.FunctionLab / sei-framework
code to run sei and obtain sei and sequence class predictions
+6 stars
from 113 · score 1.95
421.quantium-ai / research
Research experiments exploring uncommon quant techniques.
- analysis
- jupyter-notebook
- python
- quant
- quantitative-research
- research
- +7 more
+6 stars
from 63 · score 1.95
422.morphonets / SNT
The framework for quantification of neuronal anatomy
- neuroscience
- neuroanatomy-toolbox
- imagej
- imagej2
- scijava
- neurons
- +3 more
+6 stars
from 58 · score 1.95
423.Nonanti / MathFlow
C# math expression library with symbolic computation support
- csharp
- dotnet
- expression-parser
- math
- mathematics
- symbolic-computation
- +4 more
+6 stars
from 53 · score 1.95
424.hissain / jscipy
Java Scientific Computing Library - Signal Processing, FFT, Filters, PSD, DCT, SciPy-like APIs for JVM & Android used in Machine Learning and Data Science.
- android
- java
- python
- scipy
- scipy-signal
- signal-processing
- +13 more
+6 stars
from 20 · score 1.95
425.heremaps / pptk
The Point Processing Toolkit (pptk) is a Python package for visualizing and processing 2-d/3-d point clouds.
- pointclouds
- 3-d
- visualization
- lidar
- graphics-3d
- gps-data
- +2 more
+5 stars
from 630 · score 1.79
426.MenoData / Time4J
Advanced date, time and interval library for Java with sun/moon-astronomy and calendars like Chinese, Coptic, Ethiopian, French Republican, Hebrew, Hijri, Historic Christian, Indian National, Japanese, Julian, Korean, Minguo, Persian, Thai, Vietnamese
- java
- time4j
- calendar
- interval
- duration
- sun
- +2 more
+5 stars
from 469 · score 1.79
427.anassinator / ilqr
Iterative Linear Quadratic Regulator with auto-differentiatiable dynamics models
- trajectory-optimization
- differential-dynamic-programming
- theano
- dynamics-models
- auto-differentiation
- model-predictive-control
- +12 more
+5 stars
from 419 · score 1.79
428.bp-kelley / descriptastorus
Descriptor computation(chemistry) and (optional) storage for machine learning
+5 stars
from 277 · score 1.79
429.Fil / d3-geo-voronoi
Voronoi / Delaunay tessellations on the sphere
- voronoi
- d3js
- d3
- geospatial
- convex-hull
- delaunay-triangulation
+5 stars
from 273 · score 1.79
430.m-a-d-n-e-s-s / madness
Multiresolution Adaptive Numerical Environment for Scientific Simulation
+5 stars
from 216 · score 1.79
431.mapbox / wagyu
A general library for geometry operations of union, intersections, difference, and xor
- computational-geometry
- union
- intersection
- xor
- geometry
- difference
- +1 more
+5 stars
from 193 · score 1.79
432.luoyunan / DTINet
A Network Integration Approach for Drug-Target Interaction Prediction
+5 stars
from 188 · score 1.79
+5 stars
from 176 · score 1.79
434.lifanchen-simm / transformerCPI
TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524
- self-attention
- compound-protein-interaction
- transformercpi
- structure-free-virtual-sreening
- drug-target-identification
- drug-discovery
+5 stars
from 154 · score 1.79
435.brainglobe / brainreg
Automated 3D brain registration with support for multiple species and atlases.
- registration
- atlases
- brain
- neuroscience
- microscopy
- neuroanatomy
+5 stars
from 147 · score 1.79
436.AICAN-Research / FAST-Pathology
⚡ Open-source software for deep learning-based digital pathology
- deep-learning
- machine-learning
- digital-pathology
- computational-pathology
- software
- free-to-use
- +11 more
+5 stars
from 141 · score 1.79
+5 stars
from 116 · score 1.79
+5 stars
from 106 · score 1.79
+5 stars
from 87 · score 1.79
+5 stars
from 63 · score 1.79
441.RucDongLab / STAGATE
Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
+5 stars
from 50 · score 1.79
442.wukevin / babel
Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
- single-cell
- scrna-seq
- scatac-seq
- deep-neural-networks
- multi-omics
+5 stars
from 48 · score 1.79
443.myzhengSIMM / TranSiGen
The repository host gives no description.
+5 stars
from 34 · score 1.79
444.DiffSharp / DiffSharp
DiffSharp: Differentiable Functional Programming
- machine-learning
- tensor
- dotnet
- autodiff
- gpu
- deep-learning
- +1 more
+4 stars
from 612 · score 1.61
445.Shopify / measured
Encapsulate measurements and their units in Ruby and Ruby on Rails.
+4 stars
from 381 · score 1.61
446.adalca / neurite
Neural networks toolbox focused on medical image analysis
- python
- keras
- convolutional-neural-networks
- brain
- medical-imaging
- medical-image-computing
- +1 more
+4 stars
from 373 · score 1.61
447.CSBDeep / CSBDeep
Image restoration for fluorescence microscopy
+4 stars
from 332 · score 1.61
448.wildmeshing / TriWild
TriWild: Robust Triangulation with Curve Constraints
- traingulation
- meshing
- geometry-processing
+4 stars
from 261 · score 1.61
+4 stars
from 246 · score 1.61
450.GeoCoq / GeoCoq
A formalization of geometry in Coq based on Tarski's axiom system
+4 stars
from 206 · score 1.61
+4 stars
from 189 · score 1.61
+4 stars
from 184 · score 1.61
453.axondeepseg / axondeepseg
Axon/Myelin segmentation using Deep Learning
- deep-learning
- machine-learning
- myelin
- axon
- neuropoly
- spinalcord
- +5 more
+4 stars
from 125 · score 1.61
454.theislab / ncem
Learning cell communication from spatial graphs of cells
- tensorflow
- gnn
- glm
- cvae
- encoder-decoder-model
- scanpy
- +3 more
+4 stars
from 117 · score 1.61
455.Gleethos / neureka
A platform independent tensor library with autograd for the JVM
- java
- library
- deep-neural-networks
+4 stars
from 87 · score 1.61
456.OpenTire / OpenTirePython
An open-source mathematical tire modelling library
+4 stars
from 64 · score 1.61
457.d-SEAMS / seams-core
The d-SEAMS C++ core engine
- molecular-dynamics-simulation
- molecular-dynamics
- trajectory-analysis
- lua
- nix
- d-seams
- +8 more
+4 stars
from 39 · score 1.61
458.kslamph / tronlib
A production-ready Go SDK for TRON: gRPC client with connection pooling, HD wallets, TRC-10/TRC-20, event decoding, transaction simulation, and shielded TRC-20 (Sapling) support. 85% test coverage.
- blockchain
- cryptocurrency
- go
- golang
- sdk
- smart-contracts
- +14 more
+4 stars
from 2 · score 1.61
459.sigma-py / quadpy
:triangular_ruler: Numerical integration (quadrature, cubature) in Python
- quadrature
- integration
- mathematics
- engineering
- cubature
+3 stars
from 783 · score 1.39
460.jhomlala / feather
Flutter weather application with beautiful UI and UX.
+3 stars
from 688 · score 1.39
+3 stars
from 476 · score 1.39
462.mathnet / mathnet-symbolics
Math.NET Symbolics
- computer-algebra
- mathnet
- dotnet
- fsharp
- symbolic-manipulation
- math
+3 stars
from 366 · score 1.39
463.pbrod / numdifftools
Solve automatic numerical differentiation problems in one or more variables.
+3 stars
from 280 · score 1.39
464.statebox / idris-ct
formally verified category theory library
- category-theory
- formal-verification
- formal-proofs
+3 stars
from 270 · score 1.39
465.quil-lang / magicl
Matrix Algebra proGrams In Common Lisp.
- common-lisp
- matrix-algebra
- linear-algebra
+3 stars
from 253 · score 1.39
466.DICOMcloud / DICOMcloud
Azure friendly DICOMweb part 18 .NET server with qido-rs, wado-rs, stow-rs, wado-uri RESTful implementation
- dicom
- dicomweb
- dicomcloud
- wado
- wado-uri
- wado-rs
- +5 more
+3 stars
from 232 · score 1.39
+3 stars
from 218 · score 1.39
+3 stars
from 194 · score 1.39
469.mahmoodlab / TOAD
AI-based pathology predicts origins for cancers of unknown primary - Nature
- histology
- pathology
- wsi-images
- histopathology
- cancer-imaging-research
- cancer-research
- +9 more
+3 stars
from 183 · score 1.39
470.woodcrafty / PyETo
Python package for calculating reference/potential evapotranspiration (ETo).
+3 stars
from 176 · score 1.39
471.james-bowman / sparse
Sparse matrix formats for linear algebra supporting scientific and machine learning applications
- go
- golang
- matrix
- scientific-computing
- matrices
- csr
- +14 more
+3 stars
from 167 · score 1.39
472.chao1224 / ChatDrug
LLM for Drug Editing, ICLR 2024
- chatgpt
- conversation
- drug
- drug-discovery
- editing
- molecule
- +11 more
+3 stars
from 160 · score 1.39
473.MengeCrowdSim / Menge
The source code for the Menge crowd simulation framework
+3 stars
from 152 · score 1.39
474.MinesJTK / jtk
The Mines Java Toolkit
- geophysics
- scientific-computing
- visualization
- mines-java-toolkit
- java
- signal-processing
+3 stars
from 85 · score 1.39
+3 stars
from 83 · score 1.39
476.rocq-community / hydra-battles
Variations on Kirby & Paris' hydra battles and other entertaining math in Coq (collaborative, documented, includes exercises) [maintainer=@Casteran]
- coq
- hydra-battles
- ordinal-notations
- formal-proofs
- primitive-recursive-functions
- discrete-mathematics
- +2 more
+3 stars
from 78 · score 1.39
+3 stars
from 65 · score 1.39
478.mahmoodlab / MAPS
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
- cell-annotation
- multiplexed-imaging
- mpif
+3 stars
from 64 · score 1.39
+3 stars
from 57 · score 1.39
480.JaneliaSciComp / RS-FISH
Tool for precise, interactive, fast and scalable FISH spot detection
+3 stars
from 52 · score 1.39
481.ECP-Solutions / VBA-Expressions
A powerful library extending VBA with over 100 functions for math, stats, finance, and data manipulation. It supports matrix operations, and user-defined functions, enhancing automation and analysis within Microsoft Office and LibreOffice environments for data management, financial calculations, an more.
- equation-systems
- mathematical-expression-parser
- mathematical-expressions-evaluator
- determinant-calculation
- lu-decomposition
- matrix-multiplication
- +12 more
+3 stars
from 48 · score 1.39
482.chrissnell / remoteweather
A weather server supporting Campbell Scientific and Davis Instruments stations with lots of data-sharing options
+3 stars
from 31 · score 1.39
483.mrantonSG / nova_DSO_tracker
Nova DSO Tracker is an open-source Flask application for astrophotographers, providing real-time tracking of deep-sky objects' altitude, observability prediction, and integration with Stellarium and SIMBAD databases.
+3 stars
from 20 · score 1.39
484.CherishChenCherish / odatamap
Translated🗺️ Research Data Map — AI-driven global research visualization platform | Research Data Map with 250M+ papers
- academic
- ai
- china
- cloudflare-workers
- d3js
- data-visualization
- +8 more
+3 stars
from 7 · score 1.39
485.ppissias / SpacePixels
Astronomical FITS image analysis tool for detecting asteroids, comets, satellites, moving objects, and transients in astrophotography data.
- astronomy
- astronomy-software
- astrophotography
- moving-object-detection
- photometry
- variable-stars
- +6 more
+3 stars
from 5 · score 1.39
486.sbryngelson / ffmt
A fast Fortran formatter, written in Rust
- cli-tools
- code-formatter
- formatter
- rust
- rust-crate
- fortran
- +2 more
+3 stars
from 4 · score 1.39
487.unmirihealth / unmiri-ngs-fhir-schema
Vendor-agnostic, FHIR-Genomics-aligned API contract for cross-vendor NGS interpretation. JSON Schema + TypeScript + Python pydantic.
+3 stars
from 2 · score 1.39
488.rii-mango / Papaya
A pure JavaScript medical research image viewer.
+2 stars
from 580 · score 1.10
489.OpenSimulationInterface / open-simulation-interface
A generic interface for the environmental perception of automated driving functions in virtual scenarios.
- asam
- osi
- open-simulation-interface
- simulation
+2 stars
from 298 · score 1.10
490.GPflow / GPflowOpt
Bayesian Optimization using GPflow
- gpflow
- bayesian-optimization
- machine-learning
- hyperparameter-optimization
+2 stars
from 274 · score 1.10
+2 stars
from 233 · score 1.10
492.blender-nlp / MolT5
Associated Repository for "Translation between Molecules and Natural Language"
+2 stars
from 193 · score 1.10
493.sigma-py / orthopy
:triangular_ruler: Orthogonal polynomials in all shapes and sizes.
- python
- mathematics
- engineering
- physics
- chemistry
- quadrature
- +5 more
+2 stars
from 190 · score 1.10
494.CellProfiler / CellProfiler-Analyst
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
- cellprofiler-analyst
- cellprofiler
- image-analysis
- machine-learning
+2 stars
from 170 · score 1.10
+2 stars
from 81 · score 1.10
496.asarnaout / OpenGeneticAlgorithm.NET
An extensible .NET genetic algorithm library for optimization and artificial intelligence - Evolutionary computation and complex problem solving made simple
- artificial-intelligence
- csharp
- dotnet
- evolutionary-algorithm
- genetic-algorithm
- metaheuristic
- +1 more
+2 stars
from 52 · score 1.10
497.rocq-community / graph-theory
Graph Theory [maintainers=@chdoc,@damien-pous]
- coq
- graph-theory
- mathcomp
- docker-coq-action
- mathcomp-ci
+2 stars
from 44 · score 1.10
498.theislab / multigrate
Multigrate: multiomic data integration for single-cell genomics
+2 stars
from 33 · score 1.10
499.BoevaLab / CancerFoundation
CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer
- cancer
- foundation-model
- single-cell
+2 stars
from 30 · score 1.10
500.ptr1337 / makepkg-optimize
Some useful additons for makepkg for archlinux
- archlinux
- bolt
- clang
- gcc
- makepkg
- optimization
- +2 more
+2 stars
from 23 · score 1.10